3D Structure for uvig_126763_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_126763_CDS_0040 1 AcrIE6 0.71 View Alignment uvig_126763_CDS_0040 M I -D I K I M -K E -I A E K S Q E A V K Y M T V L H S A K K R N ------M K ----W D V D V V M S V M Q D Y D (60)
M D + I A L + + S +
AcrIE6 M N N D T E V L E Q -Q I K A F E L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_126763_CDS_0040 D L C K E I -Q K L A ----N --E -N (81)
++ E A
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
uvig_126763_CDS_0040 2 AcrIIC4 0.65 View Alignment uvig_126763_CDS_0040 M -I D I K I M K E ---------I ---A -E ----K ----S -Q E A V K Y M T V L H S A K K ---R -N M K (60)
M I + AV + ++ K +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R E P I K G L -F K S A V E Q F S S A R D F F K N E N -Y S K E
uvig_126763_CDS_0040 W D V D V V M -S V M -Q -D Y D -D -L C K E I Q K L A ---N -E N (96)
+ + LA
AcrIIC4 L A E K F N K E -A V N -E -A V E -K -L Q K A I D L A E K Q G I Q F
uvig_126763_CDS_0040 3 AcrIE1 0.64 View Alignment uvig_126763_CDS_0040 M -I ----D I K I M -----------K -E ----I A E ----K -S ----Q -E A V K Y M T V L H S A K K (60)
M + +A + + L + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E -S L E E A A S I L S L -I -V F Q A -E T L S D Q A N E L A N Y I R
uvig_126763_CDS_0040 R N M K W ----D V D -V V M S V M Q D Y D D L C K ----E -I -Q K L A -----N -E --N (110)
R+ + ++C ++
AcrIE1 R Q G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q -H -G I R V -Y G D A I -D R D V D
uvig_126763_CDS_0040 4 AcrIF23 0.57 View Alignment uvig_126763_CDS_0040 M -I ---------------------------------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_126763_CDS_0040 ---------------------D I K -I M K E -I -A -E -K -S -Q -E -A -V -K -Y -M -T -V -L - (120)
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q -Q M N Q -D -Q -A -E -M -A -C -D -P -S -G -L -L -T -A -A
uvig_126763_CDS_0040 H -S A K K -R -N M K ---W D V D ----V V -M S V M Q -------D -----Y -D -D -L C K -E -I Q K L (180)
++ + + + L
AcrIF23 -K F W I -E -N R -N D S A Q E I A G F V M Q -Q K A L L A Q H R S A K A A G Q A D K -V -A -K I A -A -E Y N A L
uvig_126763_CDS_0040 A N E --N (186)
AcrIF23 T A R W G F
uvig_126763_CDS_0040 5 AcrIIA28 0.55 View Alignment uvig_126763_CDS_0040 M I -------D I K I M K E I -A E K S Q E A V K Y -M T V L H S A K K R --------N M -K ----W D V D V (60)
M + +I +EK+ E+ + K +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N -K L E K K M L S D
uvig_126763_CDS_0040 V M S V M Q D -Y D -D -L C K E -I Q K -L A ---N --E N (92)
V Y L E I L +
AcrIIA28 F E E V T G I K Y -D -T L E S E L I W D N L S N K F -L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;