3D Structure for uvig_126763_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 89.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_126763_CDS_0040 1 AcrIE1 0.90 View Alignment uvig_126763_CDS_0040 M -I ----D I K I M -----------K -E ----I A E ----K -S ----Q -E A V K Y M T V L H S A K K (60)
M + +A + + L + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E -S L E E A A S I L S L -I -V F Q A -E T L S D Q A N E L A N Y I R
uvig_126763_CDS_0040 R N M K W ----D V D -V V M S V M Q D Y D D L C K ----E -I -Q K L A -----N -E --N (110)
R+ + ++C ++
AcrIE1 R Q G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q -H -G I R V -Y G D A I -D R D V D
uvig_126763_CDS_0040 2 AcrIE6 0.87 View Alignment uvig_126763_CDS_0040 M I -D I K I M -K E -I A E K S Q E A V K Y M T V L H S A K K R N ------M K ----W D V D V V M S V M Q D Y D (60)
M D + I A L + + S +
AcrIE6 M N N D T E V L E Q -Q I K A F E L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_126763_CDS_0040 D L C K E I -Q K L A ----N --E -N (81)
++ E A
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
uvig_126763_CDS_0040 3 AcrIIA34 0.83 View Alignment uvig_126763_CDS_0040 M -I D I K I M ------------------K E -I --------------A E K S Q E -------A --(60)
M + + ++ +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S I M R -K -I K A L T D Q F E T M D D L I D S L N S Y A D T H Y T W A I
uvig_126763_CDS_0040 -----V K Y M T V L H S A K K R -N M -----K -------------W D V D V V M S V M Q D Y D D L C K E I (120)
++ + VD M + +I
AcrIIA34 T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A D L A N W -E H L E D I
uvig_126763_CDS_0040 Q K L A N E -N (128)
KLA E
AcrIIA34 K K L A K E L A
uvig_126763_CDS_0040 4 AcrIF20 0.81 View Alignment uvig_126763_CDS_0040 M I D I -K -I -M K E -------I -A -E -K -S Q E A V K -Y -M T V L H S A K K R -N M K W D -V D V V M S V (60)
M AV L+ + V
AcrIF20 M T K S E -I -F K F A W V D A H Y L -A -T -T -L G G N A V E Y -F A E C L K K S H M I N ---R -T T A V S F E Q
uvig_126763_CDS_0040 M Q D Y D D L C K E I Q K L A -N E --N (81)
D+ + ++
AcrIF20 K E Y A V D V A Y A A I T I L A D G A V L
uvig_126763_CDS_0040 5 AcrIC3 0.81 View Alignment uvig_126763_CDS_0040 M I ------------D I K I M K E I A E -------K S -Q -E A V K Y M T V L H S A K K R ---------(60)
M ++ + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M -A -D K T D R G L E S R F L V P E A G N R R I E V A L
uvig_126763_CDS_0040 ---N ---M -K ----W D V D V V M ---S V M Q D Y D D L C K E I Q K L A N E N (104)
+ V + D I+K++
AcrIC3 T G R D L E A A N -A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;