3D Structure for uvig_126421_CDS_0080 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_126421_CDS_0080 1 AcrIE6 0.75 View Alignment uvig_126421_CDS_0080 M N K I D Y S T Q P K E K G -I D N Y I W V -L E T K I K L A E N D I E A L K K D L I L D V N E -N K F E K L Q Y Y S F (60)
M T + IK+ E ++ LK L +
AcrIE6 M -N -N -D T E V ----L -E ---Q -Q ----I K A F E L L A D E L K D R L P T L E -I L --S P M Y T A V M V
uvig_126421_CDS_0080 E L N R L K T I K T E L R N S L T I -L R -------V --N L K -K D L D (99)
+ R L L
AcrIE6 T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H A -A D L S I K N L C P
uvig_126421_CDS_0080 2 AcrIE1 0.66 View Alignment uvig_126421_CDS_0080 M N K -I D Y S T ---Q ------P -K -E K G I D N Y I W V L E T K I K L A E -N D I E -A L K K D L I L D V N E (60)
M K + + P ++ + +L + A + +L+ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D -L R E S L E E A A S I L S L I V F Q A -E T L -S D -Q A N E L A N Y I R R
uvig_126421_CDS_0080 N K F E K L Q Y Y S F ----E L N R -L K T -I K -T -E -L -R -N -S L T I L R V -N L K K D L D (112)
+ E + + + + +D+D
AcrIE1 Q G L E E A E G A C R N I D I M R A -K W -V E V -C -G -E -V -N -Q H G I R V Y G D A I D R D V D
uvig_126421_CDS_0080 3 AcrIIC4 0.60 View Alignment uvig_126421_CDS_0080 M N K -I -D Y S T -Q -----P K -E K G I D N Y I W V L E T K I K L A E N D I E A L K K D L I L D V -N E N K F E (60)
M T K N + K A ++ E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N -E N -Y -S K E
uvig_126421_CDS_0080 K L Q -Y Y -S F E L N R L -K -T I -K T -E L -R -N S -L T I L R V N L K K D L D (104)
+ + + +
AcrIIC4 L A E K -F N K E ----A V -N E -A -V E K -L -Q K -A I D L -A E K Q G I Q -F
uvig_126421_CDS_0080 4 AcrIF23 0.59 View Alignment uvig_126421_CDS_0080 M N K -I -D -Y S -T -------------Q ----------------------------------(60)
M+ S +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_126421_CDS_0080 --------P -------K -E K G I D N Y I W -V L E T -K I -K -L A -E N D -I E A L K K D L I L D V N E N (120)
+ + + K I
AcrIF23 G R A L T G T A R Q K E W A E K I R A -E K V Q Q M N Q -D Q A E -M A -C D -P -S G L -L T A A K F W I E N R -N D
uvig_126421_CDS_0080 K F E K L Q Y Y S F E L N R L K T ----I -K -T E L R -N -S L T I L R V N L K K D ---L -D (170)
+ L + + +
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S -A -K A A G Q A -D K V A K I A A E Y N A L T A R W G F
uvig_126421_CDS_0080 5 AcrIC3 0.57 View Alignment uvig_126421_CDS_0080 M N K I D -Y S T ---Q -------P K E K G I -D -N Y I -W -V L E -T K I K L -A E N D I E ----A L K -K (60)
M+ ++ + A +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S -S -G Q V -K -F -M A D K -T D R G -L E S R F L V P E A G -N R
uvig_126421_CDS_0080 D L I L D V N E N K -F E K -L -Q -Y -Y S F -E L N R L K T I K T E L R N S L T I L R V N L K K D -L D (114)
+ + ++ S + + +E L + R+++ K
AcrIC3 R I E V A L T G R D L E A -A -N -A -L F S -E L A A -S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;