3D Structure for uvig_124676_CDS_0080 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.40 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_124676_CDS_0080 1 AcrIE1 0.74 View Alignment uvig_124676_CDS_0080 M K F E ---D M A N W -T -E E -Q ---L K -N -E -V -V -R F -A D -E -C E -K -K Q H -I I L D Y K A -L S (60)
M D I+ LS
AcrIE1 M E -K K L S D A Q V -A -L -V A A W R K Y -P -D -L -R -E S -L E -E -A -A S -I -L S L I V F Q A -E T L S
uvig_124676_CDS_0080 E T L N Q K L L E N -D N W K I P I D G I E N V D T G H P S I E W Y E Q R H Q D D C I R I N E L T V T V D -T L -V D R (120)
+++N + + +E ++ E+ V +
AcrIE1 D Q A N E L -A N Y I R -R -Q G ---L -------E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V
uvig_124676_CDS_0080 Y A N L R K -N K G M C (132)
Y +
AcrIE1 Y G D A I D R -D V -D
uvig_124676_CDS_0080 2 AcrIE6 0.63 View Alignment uvig_124676_CDS_0080 M K F E D M A N W T E E Q L K N E V V -R F A D E C E K K Q H I I L D Y K A -L -S -E -T -L -N -Q -K L -L -E N (60)
M E L I L
AcrIE6 M N ------N D T E V L E ----Q ----Q -------I K ----A -F -E -L -L -A -D -E -L K -D R -
uvig_124676_CDS_0080 -D -N W K I -P I D G I E N V D T G H P -S I -E W Y E Q -R H Q D D C I R I N E L T V T V D T L V D -R Y -A N L R (120)
+ + Y+ R EL ++ + A L
AcrIE6 L -P T -L E I -L -----S -P M Y T A V -M V T Y D -L I G K Q L A S R R A E L I E I L E E Q Y P G H -A A D L S
uvig_124676_CDS_0080 K -N -K G M C (128)
AcrIE6 -I K N -L C P
uvig_124676_CDS_0080 3 AcrIC3 0.63 View Alignment uvig_124676_CDS_0080 M K F E D M A -N W T E E Q -L K N E ---V V R F A D E C E K K Q H I I L D Y K A L S E T -L N Q K L L -E N D N -W (60)
M + + + + ++ +
AcrIC3 M S I -Q V T S T -----N -G R T V N L E I E L G S V V A S S -G Q V K F ---M A D K T -----D R G L E S R F
uvig_124676_CDS_0080 K I P I D G I E N V D T --G H P S I E W Y E Q R H Q D D C I R I N E L T V T V D T L V D R Y A N L R K N K G M C (117)
+P G ++ +E ++ + + + L A++ K
AcrIC3 L V P E A G N R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
uvig_124676_CDS_0080 4 AcrIIA11 0.59 View Alignment uvig_124676_CDS_0080 M K F E D M A ---N W -----------------T --------------------------E E Q -(60)
M +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D -Y
uvig_124676_CDS_0080 L K N E V V -----------R F A ---D -------E C E -K -----------K ----Q H -I I -L -(120)
+ E + I
AcrIIA11 I L D N Y R V W F K N N C P M V G P L Y D D V -R F E P L D E E Q R D -E L Y F G V A I D D K R R E K K Y -V I -F T A
uvig_124676_CDS_0080 --------D Y K A L S E T L N Q K L L E N D N W K I P I D G I -E N V D T G H P S I E W Y E Q R H Q D D C I R I N (180)
+ Q + W + N E+Y +
AcrIIA11 R N D Y E N E C G F -N N V R E V R Q F I N G ---W E D E L ---K -N -------E E F Y -K A R E K K R Q E M E
uvig_124676_CDS_0080 E L T V T V D T L V D R Y A N L R K N K G M C (203)
E++ + R + N
AcrIIA11 E A N N K F A E I M Q R A D E I L W N L K E D
uvig_124676_CDS_0080 5 AcrIF23 0.57 View Alignment uvig_124676_CDS_0080 M -K F E -D M A --------N -W -T E E -Q -L K N ----E V V -----------------------(60)
M F N +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D -L -E T G I A Y D P ---S Y N Y A A N T R R A S L S P R G I D A R A V
uvig_124676_CDS_0080 -------R F A D E C E K K Q H I I L D Y K A L S E T L N Q K L L E N D N -W K I -P -I D G -I E N V D -T G H - (120)
+ + Q G ++
AcrIF23 A K T F G G R A ----L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P -S G L -L T A A K F W I E
uvig_124676_CDS_0080 P -S I E -W Y E Q R H Q D D C I R I N E L T V ------------T V D T L V D R Y A N L R K N K G -M C (176)
Q L + V ++ Y L
AcrIF23 -N R -N D -S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;