3D Structure for uvig_123847_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_123847_CDS_0014 1 AcrIE6 0.67 View Alignment uvig_123847_CDS_0014 M N V L E -K I ---V E E I E S M K N D A Y E T L K E E K R R Y G ---T -S K T A E E L E S Y I Y G L T -C A V D V (60)
MN + + E ++ + L T + + + ++++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_123847_CDS_0014 V E K Y V ----D K E ---N -V E (79)
+E N
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
uvig_123847_CDS_0014 2 AcrIE1 0.64 View Alignment uvig_123847_CDS_0014 M -N ---V L E K I -V ---E --------------E -I ----E S ----M -K -N -D -A -Y E -T L K (60)
M + + V
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I -L S L I V F Q A E T -L -S -D -Q -A N -E L -A
uvig_123847_CDS_0014 E E K R R Y G T S K ---T -A E E -L E S Y I Y G L T C A V D V V E K -Y -V ----D K E N ---V E (113)
RR ++ + V V+
AcrIE1 N Y I R R Q -G L E E A E G A C R -N I D I M R A K W V E V C G E V N -Q -H G I R V Y G D A I D R D V D
uvig_123847_CDS_0014 3 AcrIIC4 0.59 View Alignment uvig_123847_CDS_0014 M N -V L E ----K -I -V -E --------------------E -I -E -S -M K N -D -A Y E -T L -K E (60)
M
AcrIIC4 M K I T -S S N F A -T -I -A -T S E N F A K L S V L P K N H R E P I K G L -F -K -S A -V E -Q F S -S A -R D F
uvig_123847_CDS_0014 E K R R Y G -T S K T A E E L E S Y I Y G L T -C A V D V V E K -Y V D K E N -V E (102)
K + + + + ++K
AcrIIC4 F K N E N Y S K E L A E K F N K E A V N E A V E -K L Q K A I D L -A E K Q G I Q F
uvig_123847_CDS_0014 4 AcrIF25 0.56 View Alignment uvig_123847_CDS_0014 M N -V L ----E ---------K -I -V -E ----------------------E I E S -------M (60)
M
AcrIF25 M D N D D K K P D -A L I H L R V P A -E -V -K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E
uvig_123847_CDS_0014 K N D A Y E T L -------------------K E -E -K R R Y ----------------G -------(120)
+L R
AcrIF25 A A A M A R S L E D S P I F Y R N K L C A D G I V T I Q -Q -Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S
uvig_123847_CDS_0014 ----------------T -S K T A E E L E S Y I Y G L T C A V D V V E K Y V D K -E N --V E (172)
T TA G ++ +
AcrIF25 S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
uvig_123847_CDS_0014 5 AcrIIA28 0.52 View Alignment uvig_123847_CDS_0014 M N -----V -L -E K I V --------E E I E S M K N D A Y E T L K E E K R R Y G T ----S ----K T A E E (60)
M E ++ E+ + D + E R G + K + +
AcrIIA28 M K T I F T K K Q -T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D
uvig_123847_CDS_0014 L E S Y I Y G L T C A V -D -V -V -E K -Y V D K E N -V -E (92)
E + + +
AcrIIA28 F E E V T G I K Y D T L E -S -E L I W -D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;