3D Structure for uvig_121445_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_121445_CDS_0008 1 AcrIB8 0.85 View Alignment uvig_121445_CDS_0008 M N K --N E -I -A H N I T G T -Y E V S R T I A V N Y K I D Y V E G Q I I T L D K A E S W T K A G M F T P E T F G E (60)
M + A+ I+ + R I N + EGQIITL++ ESWT G FT +
AcrIB8 M K T I D R D E -I A K D I N A C I K G L G R D I R T N W E L G F E E G Q I I T L E R Y E S W T T G G D F T V C N D C P
uvig_121445_CDS_0008 Y E Y T F I P E N K V A G H E V D Y D N E E E C Y E L G C E D C D Q E C E V L L P A G T R F V I T R V A T D L D F E E M (120)
EY F EN V H VDY N EE LG EDC+ E EVLLPAGT+ + + D EEM
AcrIB8 V E Y H F E I E N E V P C H V V D Y N N K E E V I A L G A E D C E D E N E V L L P A G T K L E V V Y G E H E D D N E E M
uvig_121445_CDS_0008 G Y Y E I T I K F ----I (134)
G Y + K
AcrIB8 G F Y T V I F K Y L E E E K
uvig_121445_CDS_0008 2 AcrIF11 0.55 View Alignment uvig_121445_CDS_0008 M N K N E I A H N I T G T Y E V S R T -I A V N Y K I D Y V E G Q I I T L D K A E S W T K A G M F T P E T F G E Y E Y T (60)
M+ E+ + + + + + GE
AcrIF11 M S -----------M E L F H G S -Y E E -I S E I R D --S G V F G G L F G -A H E K E T A L S H -G E T L H R
uvig_121445_CDS_0008 F I P E N K V A G H E -V D Y ----------------------D N E E E C Y E L G C E D C D ---Q E C E V (120)
I + + E D V
AcrIF11 I I S P L P L T D Y -A L N -Y E I E S A W E V A L D V A G G D E N V A E A I M A K A C E S D S N D G W E L Q R L R G V
uvig_121445_CDS_0008 L -L P -A -G T -R F V I T R V A T D L D F E E M G Y Y -----E I T I K F I (161)
L + G + G T+ I
AcrIF11 L A V -R -L G Y T S V E -M E D --E -----H G T T W L C L P G C T V E K I
uvig_121445_CDS_0008 3 AcrIE2 0.38 View Alignment uvig_121445_CDS_0008 M N K N E I A H N I T G T Y E V S R T I A -V N Y K I D -Y V E G Q I I T L D K A E S W T K -A G M -F T P E ----T (60)
MN + ++ D E +T +
AcrIE2 M N -T Y L I D P ---R ------K -N ----N D N ----------S G E R F T -V D A -V -D I T A A A K S
uvig_121445_CDS_0008 F G E Y E -Y -T F -I P E N K V A G H E V D Y D N E E E C Y E L G C E D C D Q E C -E V L L P A G -T R F V I T R V A (120)
E ++ +E N + + E G F +
AcrIE2 A A Q Q I L -G -E E -F E -G L V Y R E T G E S N G S G M F Q A Y H H L H G T N R T E T T -V -G Y -P F H V M -E -
uvig_121445_CDS_0008 T D L D F E E M G Y Y E I T I K F I (138)
+
AcrIE2 -----------------L
uvig_121445_CDS_0008 4 AcrIC1 0.38 View Alignment uvig_121445_CDS_0008 M N K N E I A H N I -------T G -T -Y E V S R T I A V N Y ---K ---I -D -Y V E -G Q I I T -L -----(60)
MN V ++ N + I +
AcrIC1 M N N L K K T A I T H D G V F A Y K -N -T E T V I G S V G R N D I V M A I D A T H -G E F N D K N F I I Y A D T N G N
uvig_121445_CDS_0008 -D K -A E S W -T K A G --M --F T P -E T --------------------------------F --- (120)
+
AcrIC1 P I -Y L G Y -A Y L D D N N -D A H I -D L A V G A C N E D D D F D E K E I H E M I A E Q M E L A K R Y Q E L G D T V
uvig_121445_CDS_0008 G E Y E Y T F I P E -N K V A G H -E V D Y D N E E E C Y -E L G C E D -C D --Q E C -E V L L P -A G T R F V I T R (180)
+ +D + D ++L G +
AcrIC1 H G T T R L A F D D D G Y M T -V R -L D Q Q ---A Y P D -Y R P -E N D D K H I M W R A L A L T A T G K E L E V F W
uvig_121445_CDS_0008 V A T D L D F E E M G Y Y -E I ---T I -K F I (205)
++ D + EE + +
AcrIC1 L V E D Y E D E E V N S W D F D I A D D -W R E L
uvig_121445_CDS_0008 5 AcrIF9 0.38 View Alignment uvig_121445_CDS_0008 M N K N E I A H N I T G T Y E V S R T I A V N Y K I D Y V E G Q I I T L D K A E S W T K A G M F T P E T F G -E Y E Y T (60)
M Y + V +I + +
AcrIF9 M K ---------A A Y I I K E ----------V -Q N I N S --------------E ----R -E G T Q
uvig_121445_CDS_0008 F I P E N K -V A G H E V D -Y D N E E E C Y E L -G C E D C D Q E C E V L L P -A G T R F V I T R V A T D L D F E E -(120)
+ + C GT I V
AcrIF9 I E A T -S L S Q A K R I A S -K -------E Q -C ----F -------H -G T V M R I E T V N G L W L A Y K E
uvig_121445_CDS_0008 M -G Y Y E I T I K F I (132)
+
AcrIF9 D G -K R W V -D -C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;