3D Structure for uvig_120907_CDS_0073 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.87 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_120907_CDS_0073 1 AcrIE6 0.67 View Alignment uvig_120907_CDS_0073 M T N I E K N ---I I L A A L S -S Y R R K L V D Q S V S F L R A G --N ----H E D A K R S T M E A A N V N A L V (60)
M N + + A L D + +A+ A +
AcrIE6 M -N N D T E V L E Q Q I K A F -E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_120907_CDS_0073 I -K F T ---R -E K ---E --I --A I (83)
I
AcrIE6 I E I L E E Q Y P G H A A D L -S I K N L C P
uvig_120907_CDS_0073 2 AcrIE1 0.59 View Alignment uvig_120907_CDS_0073 M T --N -I -E K N -I I L --------------A ----A -L -S -S -------Y -R -R -K -L V D Q (60)
M + L +
AcrIE1 M E K K L S -D A Q -V A -L V A A W R K Y P D L R E S L E E A A S -I -L -S L I V F Q A E T -L -S -D -Q -A N E
uvig_120907_CDS_0073 S V S F L R A G N H E D ---A K R S -T -M E -A A N V N A L V I -K F ----T R -E -K -E ---I -A -I (117)
++ +R E+ A R+ A +
AcrIE1 L A N Y I R R Q G L E E A E G A C R N I -D I -M R A K W V E V C -G E -V N Q H G I R -V -Y G D A I D R D V D
uvig_120907_CDS_0073 3 AcrIIC4 0.58 View Alignment uvig_120907_CDS_0073 M T -N -I -E K N ---------I -----------I -L -A -A -L -S -S -Y R -R K L V D Q S -V S F L (60)
M + + F
AcrIIC4 M K I T S -S N F A T I A T S E N F A K L S V L P K N H R E P -I -K -G -L -F -K -S -A V E -Q F S S A R D -F F
uvig_120907_CDS_0073 -R -A G ----N H E D A K R S T -M E -A A N V N A L V I K F T -R E K E I -A I (103)
K + ++ ++ + I
AcrIIC4 K N E N Y S K E L A E K F N K E A V N E -A V E K L Q K A I D L -A E K -Q G I Q -F
uvig_120907_CDS_0073 4 AcrIF23 0.57 View Alignment uvig_120907_CDS_0073 M T N I ---E K N --I --I L -------A -A L S -------------------------------(60)
MT + +
AcrIF23 M T -N F Q T W L -D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_120907_CDS_0073 -------------S -------Y R -----------R -K L V D Q S V S F L R -A G -N H E D A K R S T (120)
+ ++ + S
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L L T A A -K F -W I E -N R N D S A
uvig_120907_CDS_0073 M E A A N V N A L V I K F T R -------------------E K E I ----A -I (165)
E+A E +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_120907_CDS_0073 5 AcrIF12 0.53 View Alignment uvig_120907_CDS_0073 M T --N I -E K N -I I ---L -A A L -S -------------------------------------(60)
M +
AcrIF12 M A Y E K T W H -R D Y A A E S -L K R -A -E T S R W T Q D A N L E W T Q L A L E C A Q V V H L A R Q V G E E L G N E
uvig_120907_CDS_0073 ---S Y R R K L V D Q S V S F L R A G -----N --------H E D A K R S T M E A A ----N V N -A L V I K F (120)
++ + A H A V +V
AcrIF12 K I I G I A D T V L S T I E A H S Q A T Y R R P C Y K R I T T A Q T H L L A V T L L E R F -G S A R R V -A N A V W Q L
uvig_120907_CDS_0073 T R E K -E I -A I (130)
T + + +
AcrIF12 T D D E I D Q A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;