3D Structure for uvig_120259_CDS_0057 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.19 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_120259_CDS_0057 1 AcrIB1 0.83 View Alignment uvig_120259_CDS_0057 M E V K T L S S D I N Y S -V H F L S E K D D L S E F S ---C ---G N K E L D K F F H E E V F I C M K Y K Y V T A Y (60)
ME K+L + + + L F +++ F HE + K + Y
AcrIB1 M E S K N L R -K L L N -E Y E E I D I N E M L K N F R S I K -N S G T K N D I E I F L H E K A I K F E K S S I S S T Y
uvig_120259_CDS_0057 C V K D Q N G L I I S L F T L A H D A V I L S S E E E K E D F I S E S S M S I S E E Y I D T -F -E -K Q S A F P A I N (120)
V I+ FT+A +++ E ++ +
AcrIB1 V V F S E D N E I L G Y F T I A N R S L V I P -K E N F G I L S K T Q Q K -K L G N S A A I L -K -N G D L M T S S F L
uvig_120259_CDS_0057 I G H L A V R K E L -Q -S E G I G T F V I N F V T N T F V D Y -K I S G C Q F I T V D S I N N P R T N K F Y V K N G F (180)
+G L + G +++F+ F+ + I ++ N P+ FY GF
AcrIB1 L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F
uvig_120259_CDS_0057 I N Q T N N D T C K P T R R M Y L P L R I Y Q I (204)
+ + + M
AcrIB1 K M L E S L T S E E G L K V M I -M --E L -K
uvig_120259_CDS_0057 2 AcrVA5 0.58 View Alignment uvig_120259_CDS_0057 M E V K T L S S D I N Y S V H F L S E K D -D L S E F S C G N K E L D K F F H E E V F I C M K Y K Y V T A Y C V K D Q N (60)
M + L +
AcrVA5 M K I E -L ---S G G ---Y I C -Y S I --------------E -----------------------
uvig_120259_CDS_0057 G L I I S L F T L A H D A V I L S S E E E K E D F I S E S S M S I S E E Y I D T F E K Q S A F P A I N I G H L A V R K E (120)
++I + V
AcrVA5 ---------E -------------------------------------D E V T I D M V E V T -T
uvig_120259_CDS_0057 L Q S E G I G T F V I N F V T N T F V D Y K I S -G C Q F I T V D S -I -----N -N P R T N K F Y V K N G F I N Q T (180)
GIG+ +I V + I + + FY N F
AcrVA5 -K R Q G I G S Q L I D M V K D V A R E ----V -G L P I G L Y A Y P Q D D S I -S Q E D L I E F Y F S N D F E Y D P
uvig_120259_CDS_0057 N N D T C K P T R R M Y L -P L R I Y Q I (201)
R
AcrVA5 D D -V --D G -R ---L -M -R W -S
uvig_120259_CDS_0057 3 AcrVA2 0.39 View Alignment uvig_120259_CDS_0057 M E --V K ---T L ---S S -----D -I ---N Y S ------------------------------(60)
M +
AcrVA2 M H H T I A R M N A F N K A F -A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G
uvig_120259_CDS_0057 -------------------------V H F L S E K D -D ---L S E F S C G N K E L D K F F -H E -E V - (120)
+ L E +
AcrVA2 G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D -E -E I I K D C K E L P D D T --P T S I -F L -N L -P
uvig_120259_CDS_0057 F -I -C M -K Y K -Y V T -A -Y C V K D ---Q N -G L I I S L F T L A H D A V I L S S E E E K E D F I S E S S M S (180)
C + + I + + +V + +
AcrVA2 -D -W C -V Y V -D I S S A -Q --I A T F D D G V A K H I K G F W A I Y D -I V E M -N G I ----N H -D V L D F
uvig_120259_CDS_0057 I S E E Y I -D T -F E K Q S A F P A I N -I G -H L A V R K E L Q S E G I G T F V -I ----N -----F V T N T F (240)
+ + + ++ + + +
AcrVA2 V V ---D T --D ----T D -D N V Y V P -Q P F I L S S G Q S V A E V L D Y -G -A S L F D D D T S N T L I K G L
uvig_120259_CDS_0057 V D -Y K I --S G C Q F I T V D -S I -N --------------N P R T N K F Y V K ----N G F -------(300)
+ IT + + G
AcrVA2 L P Y L L W L C V A E P D I T Y K G L P V S R E E L T R P K H S I N K K T G A F V T P S E P F I Y Q I G -E R L G S E V
uvig_120259_CDS_0057 ----I N Q -----T -N -N D T -----------------C -------K -P T R R M Y L P L R I Y Q I (360)
+ + +
AcrVA2 R R Y Q S I I D G E Q K R N -R -P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S G R V S S
uvig_120259_CDS_0057 4 AcrVIA1_Lse 0.38 View Alignment uvig_120259_CDS_0057 M E --V K ------T L S S D -I N ----Y S V H F L S E K D D L S E F S C G -N K E L D K F F H E E V F -I C M (60)
M +K + N + K + S
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S ----K Y N K W F -E M W -
uvig_120259_CDS_0057 K Y K Y V T A Y C V K D Q N G L -I I S -L F T -L A H -D -A V I L S S E E E K E D F I S E S S M S --I S E E Y I D (120)
K + + L + + + E ++ +
AcrVIA1_Lse K S P T S S -L V F W K N Y S -F -R C H L L F V I E K D -G E C L G I P A S V F E S V L Q I Y L A D P F -----A P
uvig_120259_CDS_0057 T F E K -Q -S -A ---------F P -A -I -N -I G H L A V R K E L Q S E G I G T F V I N F V T N T F V D Y K I (180)
+ H + E + +T +
AcrVIA1_Lse D T K -E -L -F -V E V C N L Y E C L A D -V -T -V V E H F E A ----E -E S ----A W H K L T H N E ----T
uvig_120259_CDS_0057 S G C Q F I T V D S -I ----------------N ---N P -R T N -K F Y V K ----N G F I N Q -T N ---(240)
+ + +
AcrVIA1_Lse E V S K R -V Y S -K D D D E L L K Y I P E F L D T I A T N K K -S Q K Y -N Q I Q G -K I Q E I N K -E I A -T L Y E
uvig_120259_CDS_0057 -N D T -C ---K ----P T -------R R M Y -L P L R -I Y Q I (277)
++ + L+
AcrVIA1_Lse S S E -D Y I F T E Y V S N L Y R E S A K L E Q H S K Q -I L K E -E L N
uvig_120259_CDS_0057 5 AcrIC11 0.38 View Alignment uvig_120259_CDS_0057 M E V K T L S S D I N -Y -S -V H -F -L S E K D D L S E F S C G N K E L D K F F H E -E V F I C M K -Y K Y V -T A (60)
M T + D F + +
AcrIC11 M N K E T --Q ---I -T -A S -A -V -V G E D K ----------R L E F L S K H -F G V R F A R R G E A L V F
uvig_120259_CDS_0057 Y C V K D Q ----N -G L I I S L F T L A H D A V I L S S E E E K E D F I S E S S M S I S E E Y I D T F E K Q S A F P (120)
+ ++ TL L
AcrIC11 A W L L R L A K V P I E W T R L Q Y Y T L S N S G F Y L A P ---------------------R -------E
uvig_120259_CDS_0057 A I N I G H L A V R K E L Q S E G I G T F V I N F V T N T F V -D -Y K I S G C Q F -I -T V D S -I ---------(180)
+ I ++ V + Q +S +
AcrIC11 -L R I S E C E -L --------S A D A V G I V A T M L -T -L R -----Q -L -A -H E S A A C V E A D S T Y P
uvig_120259_CDS_0057 ----N ---N P R T N K F Y V K N G F I N -Q -T N N D T C K P T R R M Y L P L R I Y Q I (227)
+ + Y + + R+
AcrIC11 A A K L A V T A S V K F A Q Q Y H H L A A Y -S -V -K ---H A E S ---I N I Y R A -I D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;