3D Structure for uvig_119218_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.27 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_119218_CDS_0004 1 AcrIE6 0.78 View Alignment uvig_119218_CDS_0004 M I -N V K A A K A A V S H Y K A E L A D I K K V L S F G L -G ------D K D V K Q L Y E S K K A C T E T A I -Q A (60)
M ++ + + + ++K L L A + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_119218_CDS_0004 L K I V I N ----M Q E -T --A -K (80)
L +
AcrIE6 L E E Q Y P G H A A D L -S I K N L C P
uvig_119218_CDS_0004 2 AcrIIC4 0.66 View Alignment uvig_119218_CDS_0004 M -I N V K A A K ---------A ----------A V S H Y K A E L A -D I K -K V L S F G L G D K D V K Q L Y (60)
M I+ + ++ + F + K L
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L A
uvig_119218_CDS_0004 E S K K -A C T E T A I Q A L K I V I N M Q E -T --A K (89)
E A+ L +I E +
AcrIIC4 E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_119218_CDS_0004 3 AcrIE1 0.63 View Alignment uvig_119218_CDS_0004 M -I ----N V K A A K ----------A ----A -V -S --------H -Y K A -E L A -D -I K -K V L S (60)
M A+ L +++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S I L S L I V F -Q -A E T -L S D -Q -A N E L A N
uvig_119218_CDS_0004 F G L G -D K D V K Q L Y E S ----K K A C T E T A I Q ----A -L -K -I V I N M Q E T --A -K (112)
+ +A + V
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H -G -I R V Y G D A I -D R D V D
uvig_119218_CDS_0004 4 AcrIC3 0.58 View Alignment uvig_119218_CDS_0004 M -I ---------------N V K A A K A A V S -----------H Y K A ----E L -A -D I K K V L S F (60)
M I + A + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V V A S S G Q V K F M A D K T D R G -L E S R F L V -P -E A G N R R I E V
uvig_119218_CDS_0004 ---G -L -G ----D K D V K Q L Y E S K K A C T E T A I Q A L K I V I N M Q E T -A -K (107)
+ + T L + +
AcrIC3 A L T -G -R -D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_119218_CDS_0004 5 AcrIF2-IC2 0.57 View Alignment uvig_119218_CDS_0004 M -I -N ---V -K -A -A K -A -A -V -S ---H Y -------K -A E L A --D I K K V L S ---------(60)
M + + + + +
AcrIF2-IC2 M A T K T A Q M I A -Q -Q -H K -D -T -V A A C E A -A E A I A I A -K D Q V -W D G -E G -Y T K Y T F D D N S V
uvig_119218_CDS_0004 ------F -G -L ---G D K D -V K -Q L Y E S -K K A C T E T A -I -Q -A L K I V I N M Q E T A K (114)
+ D D Y +A + ++ E
AcrIF2-IC2 L I Q S G T T Q -Y A M D A D D A D S -I K -G Y A D W L D D E A R S A E -A -S E I E R L L E S V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;