3D Structure for uvig_107271_CDS_0021 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.39 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_107271_CDS_0021 1 AcrIE1 0.71 View Alignment uvig_107271_CDS_0021 M K --I E I ---D -Y -N -------Q -------Y M -A -M L K -A ----F T E Y A Q C K A -E C -Y R L (60)
M + L +
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D -L R E S L E E A A S -I -L S L -I V F Q A E T L S D Q A N E -L A N Y I
uvig_107271_CDS_0021 Q A E N -E N L K -H -E V -S E L -K S C G S H -I D E Y E A E -K -S N L -F F L D F C -M ---N (112)
E + E E +
AcrIE1 R R Q G L E E -A E -G A -C R N -I D I M R A K W -V E V C G E V -N Q H G I R V Y G D A I D R D V D
uvig_107271_CDS_0021 2 AcrIE6 0.61 View Alignment uvig_107271_CDS_0021 M K I -E -I -D Y N Q ---Y M A M L K A ----F T E Y A Q C K A E C Y R L Q A E N E N L K H E V S E L K S C -G S (60)
M +Q + + + + + + + + +
AcrIE6 M N N D T E -V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_107271_CDS_0021 H I D E -Y E A -E K S N L F F L D F C M N (82)
++E Y L +
AcrIE6 I L E E Q Y -P G H A A D L -S I K N L C P
uvig_107271_CDS_0021 3 AcrIC3 0.59 View Alignment uvig_107271_CDS_0021 M K I E -I --------D Y ----N Q -Y M A M -L K ----------A ----F -T -E Y A -Q C ---K -(60)
M I +
AcrIC3 M S I Q V T S T N G R T V N L -E I E L G S V V A -S S G Q V K F M A D K T D R G L E S R -F -L V P E A -G N R R I E
uvig_107271_CDS_0021 --A -E C -Y -R L -Q A E N -E -N L K H E V -S E L K S C G -S H I D E Y E A E K S N L F F L D F C -M N (116)
A L E+ + Y +
AcrIC3 V A -L T -G -R D -L E A -A N -A -L F S E L A A -S V ---E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_107271_CDS_0021 4 AcrIF23 0.56 View Alignment uvig_107271_CDS_0021 M K -I -E -I --------D -Y -----N ----Q ------Y ------M A -M -L K ----------(60)
M + Y
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E T G I A Y D P S Y N Y A A N T R R A -S -L S P R G I D A R A V A K
uvig_107271_CDS_0021 A F --------T ---E -Y A Q C K A E C Y -R L Q A E N E N L K H E V S E L K S C G -------S ----H I (120)
F E +AE + ++ + S L + + I
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
uvig_107271_CDS_0021 D E Y E A -E ----K ---------S -------N L -F F -L -D -F C -M ---N (167)
AcrIF23 A G F V -M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A A E Y -N -A -L T A R W G F
uvig_107271_CDS_0021 5 AcrIIA11 0.54 View Alignment uvig_107271_CDS_0021 M K I E I D Y -------N ---------------Q -Y M A M -L K -A F T -E -Y A -Q C -K A E C Y R L Q (60)
M Y L
AcrIIA11 M A D M -T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W -F C -D D -K A -L A -G R -L A K I W G I L K
uvig_107271_CDS_0021 A -----E N E N L K H E V S E L K S C G S -H I D -----E Y E A ----E K ------------------(120)
+N + D + E
AcrIIA11 G I T S D Y I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F
uvig_107271_CDS_0021 ------------------------------------------S ------------N L --- (180)
AcrIIA11 T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R -Q E M E E A N N K F A E I -M Q R
uvig_107271_CDS_0021 -F -F L D F C M -N (191)
L
AcrIIA11 A D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;