3D Structure for uvig_106710_CDS_0019 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.75 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_106710_CDS_0019 1 AcrIIA21 0.71 View Alignment uvig_106710_CDS_0019 M K -Y ---F -------D --------K -G A N T I F I H I C K N I D F --------N -S -N V I K F T E (60)
M + + + + + F
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S -A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L
uvig_106710_CDS_0019 K D I I D E Y S I S V E T F Y N G L N V L Y N F D V I K A T T R K --S I Y V I N H N I I F K G S I G D F I K E Y N K Y (120)
+++ S S T + L +I Y +
AcrIIA21 I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L ----------------P ---
uvig_106710_CDS_0019 Y E N I D V I V N -D K G K V -V L E (139)
K
AcrIIA21 ---------Y -K T Y -I N E V
uvig_106710_CDS_0019 2 AcrIA3 0.49 View Alignment uvig_106710_CDS_0019 M K -Y -F D K ----G -A -----------N T I F I H I C K N -I D F N S N V I K F -T E K D I I D ---E -(60)
M Y + + + + D
AcrIA3 M S F Y I M Y I K V K E -M S E Q K Q I S L R S K Q K E L L Q R F F E I A E V D E N G D L C I P L Y D S S G D L T L -F
uvig_106710_CDS_0019 Y S I S V E T F Y -N -G L N V -L Y N F D V -I K A T T R K S I Y V I N H N I I F K G S I G D F I K E Y N K -Y -Y -(120)
+ + +++ + + + +
AcrIA3 K Q --D S R K -Y -Q M -Y A Y F ---R -I L R L I K K Q I F F I K V K K V K R D K K ------F L C -M -H -S
uvig_106710_CDS_0019 E -N -I D -V I V N D K G K V V L E (139)
V+
AcrIA3 -N -V -I D -Q ---V K S V L E S
uvig_106710_CDS_0019 3 AcrIF16 0.42 View Alignment uvig_106710_CDS_0019 M K Y -F D K G A N T I -F I H I C K N I D F N S N V I K F T E K D I I D E Y S I S V E T F Y N G L N V L Y N ---F D (60)
M K + + + + ++ T L V+ F
AcrIF16 M S L S D K K E Q K E A Y L D A L R -I A -------P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R
uvig_106710_CDS_0019 V I K ---A T T -------R -----------K S I Y V I N H N I I -----F -K -G -S ----I -G -D (120)
+ + + S +
AcrIF16 A C W E L W M F Q R K R R V L I S R K L H V L I N R S T N R T I E A F E K T Y P P E E R V V -G -K S Y R D L -V -T E
uvig_106710_CDS_0019 F I K ---------------------E Y --------N K -------Y Y -E -N I D V I V N -D -K G (180)
I + +G
AcrIF16 K G -E R S A N M Y I I N G E V V G A K D A S I L L G Y S S Y N T L Y A K M K R L G I Q P G -D D I S H L K P E -K R G
uvig_106710_CDS_0019 K V V L -E (186)
+
AcrIF16 R K K E C S
uvig_106710_CDS_0019 4 AcrIE5 0.41 View Alignment uvig_106710_CDS_0019 M K Y F D K G A N T I F I H I -C -K N I D F N S N V I K F T E K D I I D E Y S I S V E T F Y N G L N V L Y N F D V I K (60)
M N I IID + L D I
AcrIE5 M S N ---D R N G ----I I -N -----------Q ----I I D Y T G T D R D H A E R I Y E E L R A D D R I Y
uvig_106710_CDS_0019 A --T T -R -K S I Y V I N H N I I F K G S I G D F I K E Y N K Y Y E N I D V I V N D -K -G K V V L E (113)
+ ++ +I + + E
AcrIE5 F D D S V G L D R Q G L L I R E -D ------V -----------D L M ---A -V -A -A E I -E
uvig_106710_CDS_0019 5 AcrVA2 0.40 View Alignment uvig_106710_CDS_0019 M K -Y --F ----D -K -G -A ---N -T I F I H I C K N ---I D F -N S N -V I -K F ---T E K D -I I D -(60)
M+ + ++
AcrVA2 M H H T I A R M N A F -N -K -A F A N A -K D C Y K K M Q A W H L L N K -P -K H A F F P M Q N T P A L D N G L A -A
uvig_106710_CDS_0019 E ---Y ---------S I --------------------------------------------(120)
S
AcrVA2 L Y E L R G G K E D A H I L S -I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P
uvig_106710_CDS_0019 -------------------S ---V E T F Y N G L N V L Y N -F -D V I K ----A -T T R ---K S I Y V (180)
+ F ++ + +
AcrVA2 D W C V Y V D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V -E M -N G I N H D V L D -F V V D T D T D D N V Y
uvig_106710_CDS_0019 I N H N I I -F -K ----------------G ---------S I G ------------------D F -(240)
+ I +
AcrVA2 V P Q P F I L S S G Q S V A E V L D Y G A S L F D D -D T S N T L I K G L L P Y L L W L C V A E P D I T Y K G L P V S R
uvig_106710_CDS_0019 --I -K -------------------------------------E Y -N K ------------- (300)
+
AcrVA2 E E L T -R P K H S I N K K T G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q S I -I D -G E Q K R N R P H T K R P
uvig_106710_CDS_0019 ------------Y -------Y E N -I D V I V N D K G K V V L E (338)
++ G+V
AcrVA2 H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S G R V S -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;