3D Structure for uvig_106572_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.22 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_106572_CDS_0040 1 AcrIE1 0.73 View Alignment uvig_106572_CDS_0040 M R I E D M A T W T V D Q L -K -E E L V R L A D E R E S K Q H E I L D K N -E -K I -N -E -L -Q T -E L -D K M C (60)
M + L+ +
AcrIE1 M E -K K L -S D A ----Q -V -A ---L V A A W R K Y P D L R E S L -E -E A -A -S -I -L -S L I -V F -Q A
uvig_106572_CDS_0040 D Y S N -D L K R Q -L N K N A D M P F Y D E S A E I A K Y R R Q H Q D D C I T -I -N Q L G -T A -L D -V -I -I D (120)
+ + +N E+ R+ + + I
AcrIE1 E T L S D -Q A N E L A N Y I R R Q G L ----E E A E G A C R N I D I M R A K W -V -E V C G -E V -N Q -H -G I R
uvig_106572_CDS_0040 R Y A N -L R K T H G V S (133)
Y + V
AcrIE1 V Y G D A I -D R D -V D
uvig_106572_CDS_0040 2 AcrIE6 0.63 View Alignment uvig_106572_CDS_0040 M R I E D M A T W T V D Q L K E E L V -R L A D E R E S K Q H E I L D K N E K I N E L Q T -E -L -D K M C D Y S N D L (60)
M + L I +L
AcrIE6 M N --N D ----T E V L E ----Q ----Q -------I -------K ----A -F -E ----L L A D E L
uvig_106572_CDS_0040 K R Q L N K N A D M P F Y D E -S A -E I A K Y R R Q H Q D D C I T I N Q L G T A L D V I I D -R -Y -A -N -L R K -(120)
K L + + Y L +L+ L
AcrIE6 K D R L P T L --E I L S P M Y T -A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G -H -A -A -D L -S I
uvig_106572_CDS_0040 T H G V -S (126)
+
AcrIE6 K -N L C P
uvig_106572_CDS_0040 3 AcrIC3 0.61 View Alignment uvig_106572_CDS_0040 M R I E D M A -T --W -T -V -D -Q L K E E L V -R L A D E R E S K Q H E I -L D K N E K I N E L Q T E L D K M C D (60)
M T + L + +
AcrIC3 M S -I Q V T S T N G R T V N L E -I E L G S V V -A S S -G Q V ---K F M -A D K T ----------D R G -L E
uvig_106572_CDS_0040 Y S N -D L K R Q L -N K N A D -M P F --Y D E -S A E I A K Y R R Q H Q D D C I T I N Q L G T A L D V I I D R Y A N (120)
++ ++ +++ + A+
AcrIC3 S R -F L -V P E -A ---G -N R -R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q
uvig_106572_CDS_0040 L R K T H G V S (128)
+ K
AcrIC3 I N K A L -E G
uvig_106572_CDS_0040 4 AcrIIA11 0.56 View Alignment uvig_106572_CDS_0040 M R I E D M A ---T -W -----------------T V D Q L K E ----E L -V -R L -A D E R E S K Q H E I (60)
M D R A
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C -D D K A L -A -G R -L A K I W G I L K G I T
uvig_106572_CDS_0040 -L D K -N -E -K I N -E L Q -T -E L D K M C D Y S N ------D L K R Q L -N K N ----------A D --- (120)
L
AcrIIA11 S D Y I L -D -N Y -R V W F -K -N N C P M V G P L Y -D D V R F E P L D E E Q R D E L Y F G V A I D D K R R -E K K
uvig_106572_CDS_0040 --------M --------P F --------Y D E S A ----E I A K Y R R Q H Q D D C I T I N Q L G T A L D (180)
+ + + +
AcrIIA11 Y V I F T A R N D Y E N E C G F N N -V R E V R Q F I N G W E D E L K N --E E F Y K A R E K K R Q E M E E A N N K F A
uvig_106572_CDS_0040 V I I D R Y A N L R K T H G V S (196)
I R + +
AcrIIA11 E I M Q R A D E I L W N L K E D
uvig_106572_CDS_0040 5 AcrIF23 0.55 View Alignment uvig_106572_CDS_0040 M -R I E -D M A ---------T ----------W --------------------T V D ----Q L K (60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F -
uvig_106572_CDS_0040 -E -E L V -R L A D E R E S K Q H E I L D K N E K I N E L Q T E L D K M C D -Y S N -D L K -R Q L N K N A D M P F Y (120)
L A +E + ++K N Q E + +
AcrIF23 G G R A L -T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L -T A A -K F W I E N -R N D S A Q
uvig_106572_CDS_0040 D E S A E I A -K -Y -R R -Q H Q D D -C -I -T I N Q L -G T A L D V I I D R Y A N L R K T H G V S (172)
+ + + + I+ Y L G
AcrIF23 E I A G F V -M -Q -Q K -A L L A Q -H -R -S A K A A G Q A D K V A K I A A E Y N A L T A R W G -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;