3D Structure for uvig_106235_CDS_0068 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.13 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_106235_CDS_0068 1 AcrIE6 0.72 View Alignment uvig_106235_CDS_0068 M I L T L E E I E L L I I A K K S K I E A S L T T I C S -S E -Y K E D Y D T Q K R I M L C W F E T I N R L E E L -I E (60)
M E +E I A ++ + + E Y ++ IE
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_106235_CDS_0068 Y K K K I E R E R K E C E E N --G R N (80)
+
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_106235_CDS_0068 2 AcrIE1 0.64 View Alignment uvig_106235_CDS_0068 M I -L ---T L E E I E --------------------L -L -I -I -A K K S K I E A S L T T I C S S E Y K (60)
M + + +++ + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V -F -Q A E T L S D Q A N E L A N Y I R R
uvig_106235_CDS_0068 E D Y D T Q K R I M L C W F E T I N R L E E L I E Y K K K I E R E R K E -C E E N --G -R N (107)
+ + + E+
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D ---A I D R D V D
uvig_106235_CDS_0068 3 AcrIIC4 0.60 View Alignment uvig_106235_CDS_0068 M I L T L E E I E -------------------L L I I ----A K K S K I E A S L T T I C S S E -Y K E D Y D (60)
M +T I + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N --Y S K E
uvig_106235_CDS_0068 T Q K R I M L -C W -F E T I N R L E E L I E Y K K K I E R E R K E C E E N G R -N (102)
+ E + +L +I+ E +G
AcrIIC4 L A E K F N K E -A V N E A V E K L Q K A I D -L ---------A E K Q G I Q F
uvig_106235_CDS_0068 4 AcrIF23 0.58 View Alignment uvig_106235_CDS_0068 M I L ---T L E E -I E -------L L I I ------------------------------------(60)
M L+ ++ I
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_106235_CDS_0068 ----------------A K K S K I E A S L T T I C S S E --------Y K -E D Y D T Q K R I M L C W F E T (120)
+ + ++
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M A C D P S G L -L T A -A K F W I E N R N D S A Q E
uvig_106235_CDS_0068 I N R L E E L I E Y K K K I E ----R --------E -R -K -E -C E E N G ---R N (166)
I
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A -A -E Y N A L T A R W G F
uvig_106235_CDS_0068 5 AcrIF4 0.54 View Alignment uvig_106235_CDS_0068 M I L -T L E E I E ---L L I I ---A K K S K I E ----------A ----S L T -T I C S -S E -Y K -E D Y (60)
M + +I+ + + + + Y
AcrIF4 M M T I S K T D I D C Y L Q T Y V V I D P V S N G W Q W G I D E N G V G G -A L H H G R V E M V E G E N -G Y F G L R G
uvig_106235_CDS_0068 D -T Q K -R I M L C W -F E T I N R L E E L I E Y K K -K -I E -R -E -R K E C E E N G R -N (109)
T + + L E E
AcrIF4 -A T -H P -T E K E A M A A A L G Y L W K C R Q D L V A -I -A R -N -D A I E A E K Y R A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;