3D Structure for uvig_104398_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.95 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_104398_CDS_0016 1 AcrIE1 0.75 View Alignment uvig_104398_CDS_0016 V K T E E I L Q -H L G D L K -S E -A E G H Y -T D D G D N E I F H Q D A E A L Q A A I D A V K R N E A I A A A I S G (60)
L+ E A +L++++ + A +
AcrIE1 M -E K K -L S D A -Q ---V -A L -V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N
uvig_104398_CDS_0016 E I -A -A C -N -R E I R K V D I E K A K A E E R R M N Y G D R R T -M L M -E -L L -R T I K -G G E -E (115)
I E+ + + + + + + +
AcrIE1 Y I R -R Q -G -L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I -R V -Y G D A I D -R D V D
uvig_104398_CDS_0016 2 AcrIE6 0.64 View Alignment uvig_104398_CDS_0016 V K T E E I L Q H L G D L K S E A E G H Y T D D G D N E I F -H Q D A E A L Q A A -I D A V K R N E A I A A A I S G E I (60)
L + + +F A+ L + + S
AcrIE6 M N --N D T E V L E ---Q Q I ----K ------A F E -L L A D E L K D R L -P T L E I ------L -S P M Y
uvig_104398_CDS_0016 A A C N R E I R K -V -D I E K -A -K A E E R R M -N Y G D R R T M L M E L L R T I -K G G E E (109)
A + L +I
AcrIE6 T A V M V T Y D L I -G -K Q L A -S -R R A E L I E I L E E Q Y P G H A A D L -S I K -N L C P
uvig_104398_CDS_0016 3 AcrIC3 0.64 View Alignment uvig_104398_CDS_0016 V K T E E I L Q H L G D ---L K -S -E -A -E -G H Y -T D D G D N E I F H -Q D A E A L Q -A A I D A V K -R N -(60)
+ + G L G L +
AcrIC3 M S I -Q V T S T N G R T V N L -E -I -E -L -G -S V V A S S G Q V K F M A D K T D R G L -E S R F L V P E A -G N
uvig_104398_CDS_0016 E A -I A A A I S G E I A A C N R E I R K V D I E K -A K A -E -E R R M N Y G -D R R T -M L -M -E L L R T I K -G (120)
+A+ ++ A N A Y + +
AcrIC3 R R I E V A L T G R D L E A A N A L F S ---E -L A A S -V -E A T N E M Y -R E L D -A E -R -A -Q I N ---K -
uvig_104398_CDS_0016 -G --E E (126)
AcrIC3 A -L E -G
uvig_104398_CDS_0016 4 AcrIF23 0.57 View Alignment uvig_104398_CDS_0016 V -K T E E I L Q -------H L G -D --------L K S --E A E G ---------H Y ----T D ----D (60)
L + D
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A --Y D P -S Y N Y A A N T R R A S L S P R G I D A R A V A
uvig_104398_CDS_0016 ---G --D ---N E I F H Q D -A E A -L Q A A -I D A V K R N E A I -A A A I S -G E I A A C N R E I R K V D -I (120)
G + + + A A G + A
AcrIF23 K T F G G R A L T G T A R Q K E W A E -K I R A -E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W ----I E -
uvig_104398_CDS_0016 -E -K A K A E E R R M N Y G D R R T M L M ----E ------------L -L -R T I K G G ---E -E (175)
L
AcrIF23 N -R -N D S A Q E I A G F V M Q Q K A L L A Q H R -S A K A A G Q A D K V A K I -A A E Y N A L T A R W G F
uvig_104398_CDS_0016 5 AcrIF2-IC2 0.56 View Alignment uvig_104398_CDS_0016 V K T E E I L -Q ---H L G ---D L K S ------E -A E G H Y T D D G D N E I -F H Q D A E A L Q ---A A I D (60)
+ + A D D +
AcrIF2-IC2 M A -T K T A Q M I A Q Q H K D T V A A C E A A E A I A -I A K D Q V W D G E G Y T K Y T F -D D --N S V L I Q S --
uvig_104398_CDS_0016 A V K R N E A -I A A A I -S G E I A A C N R -E I -R -K -V D -I E K A K A E E -R R -M N Y -G -D -R R T M L M (120)
A ++ I + +
AcrIF2-IC2 ----G -T T Q Y A M -D A D D A D ----S -I K -G -Y -A D --------W -L D D E A R -S -A E A S E I E
uvig_104398_CDS_0016 E L L R T I K G G E E (131)
LL ++ E
AcrIF2-IC2 R L L E S V E -E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;