3D Structure for uvig_102573_CDS_0057 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.72 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_102573_CDS_0057 1 AcrIE6 0.73 View Alignment uvig_102573_CDS_0057 M -N A -Y E L M K E F ---Y D L D N E I L E L V N K K N K K -----D -A A -W ----M D K A I D S K L S R Q L (60)
M N L L E+ + + K + S+ +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M -V -T Y D L I G K Q L A S R R A E L I
uvig_102573_CDS_0057 E I K -H T -L E -R I --N ---V -V -L (83)
EI ++ +
AcrIE6 E I L E E -Q Y P G H A A D -L S I K N L C P
uvig_102573_CDS_0057 2 AcrIF23 0.58 View Alignment uvig_102573_CDS_0057 M -N A Y E L M K ---E -F Y D L D ------N E --I L E ----L V N K ---K -----N K ---------(60)
M N + + + +
AcrIF23 M T N F Q T W L D S A D I P V Q -Q N G Q W I D L E T G I A Y D P S Y N Y A A -N T R R A S L S P R -G I D A R A V A K
uvig_102573_CDS_0057 -------K ----D A A ----W --------M ----D ------------------K ------- (120)
AcrIF23 T F G G R A L T G T A R Q K -E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q
uvig_102573_CDS_0057 A I D -S ---K L S R Q L E I K ------------H T ----L E R I N V V --L (165)
I L + +++
AcrIF23 E I -A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_102573_CDS_0057 3 AcrIE1 0.58 View Alignment uvig_102573_CDS_0057 M --N ----A -Y -E -L M -K ---E ----------F Y D L D ----N ----E I ----L -E -L V N K (60)
M + + L+N
AcrIE1 M E K K L S D A -Q -V -A -L V A A W R K Y P D L R E S L E E A A S I L S L I V -F Q A E T L S D Q A -N -E L A N Y
uvig_102573_CDS_0057 K -N K K D A A W ---M D ---K -A -I -D -S -K -L -S -R Q L -E I -K -H T L E R I -N V ----V -L (118)
+ + E R+
AcrIE1 -I R R Q G L E E A E G A C R N I D I -M -R -A -K -W -V -E V C -G E -V -N Q H G I R V Y G D A I D R D V D
uvig_102573_CDS_0057 4 AcrIIC4 0.58 View Alignment uvig_102573_CDS_0057 M -N -A Y E L M K --------E -------F Y -D --------L -D -N -E -I -L E -L V N K K ---N (60)
M +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F K S -A -V -E -Q -F S -S A R D F -F K N E
uvig_102573_CDS_0057 K K ----D -A -A -W M D K A I D S K L S R Q L E I K H T L E R I N V V L (99)
+ A+ + + + +E+ +
AcrIIC4 N Y S K E L -A -E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_102573_CDS_0057 5 AcrIIA28 0.57 View Alignment uvig_102573_CDS_0057 M -N ------A Y E L M K E -----F -Y D L D N E I L E L V N K K -N K -----K -------D A A W M D K (60)
M + EL + +L N + + + M
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K -Q K E L F N S M H D F R S Q H A K -E A R I P G W S D K Y N K L E K K M L S
uvig_102573_CDS_0057 A I D S K L -S R Q L E I --K H T L E -R -I N V ---V -L (92)
+ + + + N
AcrIIA28 D F E E V T G I K Y D T L E S E L I W D N -L S N K F L Y -N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;