3D Structure for uvig_102201_CDS_0111 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.37 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_102201_CDS_0111 1 AcrIE1 0.74 View Alignment uvig_102201_CDS_0111 M K -K -Y ---T A -N V ---D -------V Y K -A -I -N E -----------E ---L E K L E -R -Y -(60)
M K V + L
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E -A -A -S I L S L I V F Q A E T L S D Q A N E L A N -Y -I
uvig_102201_CDS_0111 K H -----A I K D L N G T I ----R -S -L -E -N -E L K -K -I Q -N -D I R T I S E S --Q --N W (116)
+ + + +I + +
AcrIE1 R -R Q G L E E A E G A C R N I D I M R -A -K -W -V -E V C -G -E V -N -Q H G I R V Y G D A I D R D V D
uvig_102201_CDS_0111 2 AcrIE6 0.68 View Alignment uvig_102201_CDS_0111 M K K Y -T A N V D V Y K A I N E -------E L E K L E R ---Y K H ----A I K D L N G T I R S L E N E L -K K (60)
M + KA L LE + ++ S EL
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_102201_CDS_0111 I Q N D I R T I S E -S --Q --N W (79)
+
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
uvig_102201_CDS_0111 3 AcrIC3 0.65 View Alignment uvig_102201_CDS_0111 M K -K Y -----------T A N V D V Y -----------K -A I ---N ----E -----E -------(60)
M V
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D -K T D R G L -E S R F -L V P E A -G N R R I E V
uvig_102201_CDS_0111 ---L E K L E R Y K H A I K D L N G T I R S L E N E L K K I Q N D I R T I S E S Q N W (104)
LE + +L ++ + + + +I+
AcrIC3 A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_102201_CDS_0111 4 AcrIF23 0.57 View Alignment uvig_102201_CDS_0111 M K K ---Y -T -A ---N -----------V D -----------------------V Y -------(60)
M A +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A -R A V A K T F
uvig_102201_CDS_0111 --------K --------A -I -N -E --------------E -------L -E -K L -E -R -Y K - (120)
E + +
AcrIF23 G G R A L T G T A R Q K E W A E K -I -R -A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K -F W -I -E -N R -N
uvig_102201_CDS_0111 H -----------A I K D L N G T I R ----S L -E -N -E L K K I Q N D I R T I S E S Q N W (171)
K L + R + KI + ++ +
AcrIF23 -D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q -A -D K V A K I A A E Y N A L T A R W G F
uvig_102201_CDS_0111 5 AcrIIA11 0.54 View Alignment uvig_102201_CDS_0111 M K K Y --T A N ----------V D --------------------------------------V (60)
M + +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y I
uvig_102201_CDS_0111 Y -K A I N -E E L -E -K L E -R ----Y K H -----------------------------------(120)
AcrIIA11 L D -N Y R V -W F K -N N C -P -M V G P L Y -D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T
uvig_102201_CDS_0111 -----------------------------------A I K D L N G T I R S L E N E L K K I Q N D I R T (180)
A + N I + +
AcrIIA11 A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N N K F A E I M Q R A D E
uvig_102201_CDS_0111 I S E -S -Q N W (189)
I
AcrIIA11 I L W N -L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;