3D Structure for ivig_891_CDS_0088 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.49 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_891_CDS_0088 1 AcrVIA2 0.86 View Alignment ivig_891_CDS_0088 M W K C K K C G G T D F I E E I S G G S Q K S -V F D K E G N V K E I Y D Q D I E Y S D L Y C S K C N K S G K S I E E I (60)
MWKCKKCG F +I+GG + DK+G V + D +EY D C KC S I EI
AcrVIA2 M W K C K K C G C D R F Y Q D I T G G I S E V L E M D K D G E V L D E I D D -V E Y G D F S C A K C D N S S S K I Q E I
ivig_891_CDS_0088 A V ---W ----------E D (78)
A +
AcrVIA2 A Y W D E I N G K N K T Y L S K D K
ivig_891_CDS_0088 2 AcrIF22 0.46 View Alignment ivig_891_CDS_0088 M -W -K C K K C G -G ----T D F -I E -E -I S -G G S Q K S V F D K E G N V K E I Y D -Q -D -I -E Y S -D L (60)
M F + S+ +K+G + + +
AcrIF22 M S K K F L E I -V G N A S T S A T F N G K L -I -G H -N V N A S A Y E K D G E I I I H L E T N G S R W K S S P E V R
ivig_891_CDS_0088 Y C -S K C N K S ----G K S --I ---E E ---I A V W E D (93)
+ + E + +
AcrIF22 M T K E E Y D S F C E K Q S R P L F V R G I E -L F G A E A L L S
ivig_891_CDS_0088 3 AcrIB6 0.46 View Alignment ivig_891_CDS_0088 M -W -K C K K C G G ------------------T D F I E E I S G G S Q K S V F D K -E G N V ----K E I Y (60)
M G EE++
AcrIB6 M G K T Y W Y N E G T D T L L T E K E Y K E L M E R E A K A -L Y E E V Q E E E K D F E S S -E K T -S F E E F L K T C
ivig_891_CDS_0088 D -Q D -I -E Y S D L Y C S K C N K S G K S I E E I A V W E -D (93)
+ E
AcrIB6 Y E --N -E -S D F V L S D N ------E ---G N K L E E W
ivig_891_CDS_0088 4 AcrIIA26 0.45 View Alignment ivig_891_CDS_0088 M W -K -C K K C -G --G ----------------------------------------------(60)
M G
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D E
ivig_891_CDS_0088 ------------------------------------------------------------ (120)
AcrIIA26 Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N K N R K S E
ivig_891_CDS_0088 --T D F I E E I S G G S Q K S V F D K -E G N V K E -I Y D ---Q --D --I -E Y S D L Y C S K ---C N K S G K (180)
+ I + + Y D S + G
AcrIIA26 F Y G N G L K V I A E Y L E S I -S H E D A L -A --V V -T Y Y Y F Y F -G F -G -Y E D Q L I S D I K D D Q E D G V
ivig_891_CDS_0088 S I E E I A V W E -D (191)
E + E
AcrIIA26 K F E H V E R S E T I
ivig_891_CDS_0088 5 AcrIF18 0.45 View Alignment ivig_891_CDS_0088 M W K C K -K -C -G G T D -F I E E I -S G G S Q K S V F D K E G N V K E I Y D Q D I E Y S D L Y C S K C N K S -G K (60)
M K + G + FD G + +
AcrIF18 M T T I K A A Y -I S K D Q N W -N --D -G T -T T Y W F D V N G E T F G V V H G G E S W N A K V V D C D G A P S D Q
ivig_891_CDS_0088 -S I E E ---I A V W -E D (75)
+++ +
AcrIF18 Y T V D Q F N I T E D M I A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;