3D Structure for ivig_6_CDS_0075 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.10 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_6_CDS_0075 1 AcrIIA33 0.68 View Alignment ivig_6_CDS_0075 M I K W N G K S -T N G -I W K K E I I T N D Y E E L L E E L V D C D I I D G Y W N M D S Q A F D G L C D C S E M L E K (60)
MIKW+GKS + + Y LLE LVD I Y DSQ+F L
AcrIIA33 M I K W T G K S T D K -G W -I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V ---S P A
ivig_6_CDS_0075 L R D -E Y Q E -A I E E D -D -D E K I E A F Q E K I D S I D W H E D V F S K L S E D D F K Y V I R G C N S Q A Y Y Q (120)
+ + + +E E +++ VF KL++ F +I GC+SQAYYQ
AcrIIA33 V A -D L -E D R L -N --D -E -H Q V E Q A L E D L E N F -D W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q
ivig_6_CDS_0075 E F E E V E E D (128)
EFE +
AcrIIA33 E F E V -I -E
ivig_6_CDS_0075 2 AcrIIA26 0.63 View Alignment ivig_6_CDS_0075 M I K W N --G K -S T N -G I W K K E I ---I T N D ---Y E E L L E E L V D ---C ----------D -I I D (60)
M K N + + ++ LVD D
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q -N Y K D
ivig_6_CDS_0075 G ---Y W -------N M D S Q A F D G L C D C -S -E M L E K L R D E Y Q E A -I E E D D D E K I E A F Q E -K I (120)
Q+F+ L + E D +E + K
AcrIIA26 E Y N G V Y E N D G D T G E F V G Q V F E N K V -T E -E -Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N K -
ivig_6_CDS_0075 D -S -I D ---W ----H E D V F S K L S E D D --------F --------K -----Y -V -I -R -G -C (180)
+ + +S +D
AcrIIA26 N R -K S E F Y G N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E -D Q L I S -D -I -K -D -D -
ivig_6_CDS_0075 -N -S Q A Y Y Q E F E E V -E E D (198)
+ E E
AcrIIA26 Q -E D G V K F E H V E R -S E T I
ivig_6_CDS_0075 3 AcrIF13 0.60 View Alignment ivig_6_CDS_0075 M I K W N G K S T N G I W K K E I I T N D Y E E L L E -E L V D C D I I D G Y W -N --M D S Q ---A -F D G L C D C (60)
M K I+ + + Y D
AcrIF13 M -K ---------L L N I K I N -E F A V -T -A N T E -A -G D E L Y L Q L P H -T P D S Q H S I N H E P L D D
ivig_6_CDS_0075 S E M L E K L R D E Y Q E A I E E D -D D E K I E A F Q E -K I D S ----I -D W H E D V F S K L S E D D F K Y V I R (120)
+ + + + E D + + + + V + + D
AcrIF13 D D F V K E V Q E I C D E Y F G K -G -D R T L A R L S Y A G -G Q A Y D S -Y T E E D G V Y T T N T G D Q -F V E H -
ivig_6_CDS_0075 -G C N S Q A Y -Y Q -E -F E E V E E D (141)
Y ++
AcrIF13 S Y -A -D Y Y N V -E -V Y C K A D L V
ivig_6_CDS_0075 4 AcrIIC5 0.59 View Alignment ivig_6_CDS_0075 M I K W ---N G K S -T N G I W K K E I I T N D Y E E L L E E L V D C -D I I D G Y W N M D S Q A F D G L C D C S E M (60)
M G + + N E + +I D E
AcrIIC5 M N N S I K F H V S -Y -D G T -A R A L -F N T K E Q A E K Y C -L V E E I N D E M N G ---Y K R ---K S W E E K
ivig_6_CDS_0075 L E -K L R D E Y Q E A I E E -D D D E K I E A F -Q E K I D S I D W H E -D V F -S K ----------L S E D D F (120)
L Q+ +E + + + + +
AcrIIC5 L R E E N C A S V Q D W V E K N ---------Y T S S Y S D L ---F N -I C E I -E V S S A G Q L V K I D N T E V
ivig_6_CDS_0075 K Y V I R G C N S Q A Y Y Q ---E -----------F E E V -E E D (157)
+ C F E
AcrIIC5 D D F V E N C Y G F T L E D D L E -E F N K A K Q Y L Q K F Y A E C E -N
ivig_6_CDS_0075 5 AcrIIC1 0.56 View Alignment ivig_6_CDS_0075 M I K W N G K S T N G I W K -K E I -I T N D Y E E L L -E -E L V D C D I I D G Y W N -M D S Q -A -F D G -L -C D (60)
M I + Y +
AcrIIC1 M -A ----------N K -T Y K I -G ------K -N -A G -------Y -D G -C G -L -C L -A A -I S E
ivig_6_CDS_0075 C S E M L -E -K L R D E Y Q E A I E E D D D E K I E A F Q E K I D -S I D W H E D V F S K L S E D D -F K Y V I R G C (120)
LRD + + D+K+E + + +
AcrIIC1 N E A I K V -K Y L R D I C P D Y -D --G D D K A E D W L R W G -T -D S R V K A A A L E M E Q Y -A -Y T S V G M -
ivig_6_CDS_0075 N S Q A Y Y Q E F E E V E E D (135)
+ +E V E
AcrIIC1 -----A S C W E F V -E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;