3D Structure for ivig_483_CDS_0026 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.87 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_483_CDS_0026 1 AcrIE6 0.75 View Alignment ivig_483_CDS_0026 M K T Y A D T F K D K I I G L S K E E L Q -N L R D S I F D K I E V Y R E R L A I V -S ---N D K K V H D L T V S I R (60)
M + + + + + + ++ + ++
AcrIE6 M N N D T E V L E ----Q ----Q I -K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A
ivig_483_CDS_0026 R K K I E I R E I N -K L L K ---Q C -H ---T -T (88)
+++E+ EI
AcrIE6 S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
ivig_483_CDS_0026 2 AcrIIC4 0.60 View Alignment ivig_483_CDS_0026 M K T Y A D T F ----K ----D K I I G -L ----S K E E L Q N L R D S I F D K I E V Y R E R L A I V -S N D K K (60)
MK +F K+ +E + L S+ + R+ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
ivig_483_CDS_0026 V H -D L -T V S I R R K K I E I R E I N K L L K Q C H T -T (91)
+ + + + L+
AcrIIC4 A E K -F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
ivig_483_CDS_0026 3 AcrIE1 0.60 View Alignment ivig_483_CDS_0026 M K T Y ----A D -T -F -K D K ----I -I G -----L --------S K E E L Q N L R D S I F D K I E V Y R (60)
M + +++ D +
AcrIE1 M E K K L S D A Q -V -A -L V A -A W R K -Y --P D L R E -S L E E A A S I L -S L I V F Q A E T L S D Q A N E L A
ivig_483_CDS_0026 E R L A I V S N D K K V H D ---L -T -V -S -I -R -R -K -K I E I R E I N -K L L K ----Q C -H ---T -T (120)
+ + E+
AcrIE1 N Y I R R Q -G L E E A E G A C R N I -D -I -M -R -A -K -W V E V C G E V -N Q H G I R V Y G D -A I D R D -V D
ivig_483_CDS_0026 4 AcrIF23 0.56 View Alignment ivig_483_CDS_0026 M K T Y A D T ------F ---K -D K I I G ------------------------------------(60)
M + I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
ivig_483_CDS_0026 --L ----------------------S K E E L -Q -N L R -D S I F D K -I E V Y R E -R L A I V S --N (120)
+ + + + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D -Q -A E M -A C D P -S G L L T A -A K F W I E -N R N D S
ivig_483_CDS_0026 D K K V H ----D -L -T V -S -I R ----R K K -----I E I R E I N K L L K Q C H ---T -T (172)
+ K + I
AcrIF23 A Q E I A G F V M -Q -Q -K A -L -L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G F
ivig_483_CDS_0026 5 AcrIF25 0.54 View Alignment ivig_483_CDS_0026 M K T Y A D T ----F K D K I -I G -------------------------------L ---------(60)
M + + ++
AcrIF25 M D N D D K K P D A L I H L R V P --A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L -S I A E V L E E A
ivig_483_CDS_0026 ----------------------------------------S K E E L Q N L R D S I F D K I E V Y - (120)
++ ++ +
AcrIF25 A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L
ivig_483_CDS_0026 R E R L A I V -S -----N D K K V H D L T V S I R R K K I E I R E I N K L L K Q C H ---T -T (170)
+ + + + I + L
AcrIF25 P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D -G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;