3D Structure for ivig_4070_CDS_0067 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.16 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_4070_CDS_0067 1 AcrIIA7 0.77 View Alignment ivig_4070_CDS_0067 M N F G Q A L E A L K Q G K K V K R S I -W G G -Y W F L S K -N ------------P -E V K E ----E L N A G (60)
M+FGQALE LK G+ V R G + + + E +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V -K S L P E S F K R W V A N N
ivig_4070_CDS_0067 Y -V -R E F -Q -T -----H -D -M -I F A V L K D N G G V V P A Q A -Y Q A D M L A E D W E V V E (113)
+ G +V + Q DMLA DW +VE
AcrIIA7 -H -G -D -S -E -T D R I K -F -T -A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
ivig_4070_CDS_0067 2 AcrIIA4 0.56 View Alignment ivig_4070_CDS_0067 M N F G Q A L E A L K Q -G K K V K R S -I -------------W --G G Y W F L S K N P E V K E E L N A G Y V R (60)
MN ++ +K+ VK S G +S E E V
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N -N D G N E Y V I S E -S E N -E ----S I V -
ivig_4070_CDS_0067 E F Q T H D M I F -A V L K D N G G V V P A Q A Y Q A D M -L A -E D ---W -E V --V -E (107)
+ + K G + +
AcrIIA4 -----E K F I S -A F K N --G W N Q E Y E D E E E -F -Y N D M Q T I T L --K S E L N
ivig_4070_CDS_0067 3 AcrIF18 0.54 View Alignment ivig_4070_CDS_0067 M N F G Q -A L --E --A L K -Q -G K K V K R -S I W G G Y W F L S K N P E V K E E L N A G Y V R E F Q T H -D M I (60)
M+ A G + G + + +
AcrIF18 M T T I K A A Y I S K D Q N W -N -D G T T T Y W F D V N G E T F G V V H G ------------G -----E -S W
ivig_4070_CDS_0067 F -A V L K D N G G V V P A Q A Y --Q A D M L A E D -W E V V -E (94)
V+ G Q Y + + E
AcrIF18 N A K V V D C D G A P -S D Q -Y T V D Q F --N I -T E D M I A E
ivig_4070_CDS_0067 4 AcrIIA12 0.52 View Alignment ivig_4070_CDS_0067 M -N ---F G Q A ---L E A L K -Q -G K K V K R -S I -W ---G -G -Y W F L S K N P E V K E E L N -A G Y -V (60)
M + + +K + S+ + AG
AcrIIA12 M S K T M Y K N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A -A T Q Y F R C P E K H V ---S D A G V Y Y
ivig_4070_CDS_0067 R E F Q T H D M I F -A V L K D N G G V V P A Q A Y Q A D M L A E D W E V V E (99)
+ + ++ D E +
AcrIIA12 G ---E D F E F D G F E I F E D D -L I Y T R S ----Y ---D K E E L N
ivig_4070_CDS_0067 5 AcrIIA24 0.51 View Alignment ivig_4070_CDS_0067 M -N F G Q A L E A L K Q G K K V K -R S I W -G G -Y W F L -S K N P E V K E E L N A G Y V R E F Q T H D M I F A V L (60)
M Q+L +K+ + + + Y V
AcrIIA24 M K K A Q Q L L K E I K T N N V S Y A I -M D E -D N E I Y C N K E T N N I M D I Y -G -Y D N ---E N G H F Y G V Y
ivig_4070_CDS_0067 K -D N G G V V P A Q A Y ----Q A D M -L -A -----E D -------W E V ----------V -E (115)
G + + E
AcrIIA24 G D V V D G Q I D S R Y F S D D A I L N -A -I D K L L F L G -D P I K R T D L P -S D A D F K R T F F F E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;