3D Structure for ivig_4070_CDS_0065 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_4070_CDS_0065 1 AcrIE1 0.71 View Alignment ivig_4070_CDS_0065 M --D N Q ---Y L A -E -------R -I ----D R L E K L V N D L D S V N R D Q Q K V I N D L C M R I -E G V (60)
M + ++ + + +++ + + +N+L I
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L -R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G
ivig_4070_CDS_0065 V N T I D H L K K E L S -T -K M -S V L -P K D A Q E K I E -K L K -K -A A E G I -V --D G (109)
+ ++ + + + ++ + + +
AcrIE1 L E E A E G A C R N I -D -I M -R A -K W -V E V C G E V N Q -H G I -R V Y G D A I D R D V D
ivig_4070_CDS_0065 2 AcrIC3 0.58 View Alignment ivig_4070_CDS_0065 M D N Q --Y -L A -E ------R I D R L E K L V N D L D S -V N -R -D Q Q K V I N D L C --------M R I -(60)
M Q + + + + + + R
AcrIC3 M S I Q V T S T -N G R T V N L E I E L G S V V A S S G Q V K -F M A D -K -T D R G L E S R -F L V P E A G N R R -I
ivig_4070_CDS_0065 E -----G V V N T I D H L K K E L S T K M S V L P K D A -Q -E -K I E K L K K A A E G I V D G (110)
E + + L EL + ++ + + +++G
AcrIC3 E V A L T G R D L E A A N A L F S E L A A S V E A T N E M -Y -R -E -L D A E R A Q I N K A L E G
ivig_4070_CDS_0065 3 AcrIE6 0.54 View Alignment ivig_4070_CDS_0065 M D N Q Y L A E R I D R L E K L V -N D L D S V N R D Q Q K V I ---N D L C M R I E G V V N T I -D H L K -K -E -L (60)
M N E ++ K+ L +D + + + I +
AcrIE6 M -N -N D T E V L E Q Q I K A F E -L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G -K Q L A -S -R R
ivig_4070_CDS_0065 S T K -M S V -L P K D A Q E K I E K L K K -A A E -G -I V D G (93)
L ++ + +
AcrIE6 A -E L I -E I L E E Q Y P G H A A D ---L S I -K -N L -C P
ivig_4070_CDS_0065 4 AcrIIA11 0.52 View Alignment ivig_4070_CDS_0065 M D N Q Y L A ---E R I -------------------D R L E K -L V N D L D S V N R D Q Q K V I N -D -L C (60)
M L ER D L ++
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C -D -D K A L A G R L A K I W G I L K G -I T S
ivig_4070_CDS_0065 M -R I -E G V V --------N T I D H L K K ---------E L S -----------------------(120)
+ + L E
AcrIIA11 D Y I -L D N Y -R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A
ivig_4070_CDS_0065 ---------------------T -K M -S V ------------L ----P K D A ----Q -E -K -I (180)
+A
AcrIIA11 R N D Y E N E C G F N N V R E V R Q F I N -G W -E D E L K N E E F Y K A R E K -K R Q E M E E A N N K F -A -E -I -
ivig_4070_CDS_0065 -E K L -K -K -A A E G I V D G (197)
+ ++ + +
AcrIIA11 M Q R -A -D -E I L W N L K E D
ivig_4070_CDS_0065 5 AcrIB9 0.52 View Alignment ivig_4070_CDS_0065 M D --N Q ----Y ----L -A ----E -------------------------------------(60)
M Y E
AcrIB9 M N K F A F E N D K Y L E R N -I -K A V V E K I A R D F N L H L K S K Y S K D C E F T V V A D N S F D N I E N S T I F
ivig_4070_CDS_0065 -------------------------------------------R I ------D R L E K L V N D (120)
+ K ++
AcrIB9 L E I K R N D G K A C Q D H H I Y A E Y E C D E D D N E Y I A L T V K F Y G S S A S N Q -I N T V Q G I K S S K Y A S C
ivig_4070_CDS_0065 L D -S V N -R D Q Q K V I N D L C M R I -E G V V N T I D H L K K E L S T K M --------S V L ----P K -D A (180)
+ + +K I +L + + E K +
AcrIB9 I V S -D T D N Q L S K S I H E L N L K K E K E Q Q E A W N K K E A E Y A R K K Q A Y V S Q S Q R E K Y E D I -F D -L
ivig_4070_CDS_0065 -Q E K -I E K L -K K A -A E G I V D G (201)
G +
AcrIB9 P -F D F -Y D Y I -D K K E Q G -L -I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;