3D Structure for ivig_359_CDS_0074 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.21 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_359_CDS_0074 1 AcrIE6 0.73 View Alignment ivig_359_CDS_0074 M A R S Y E ---T A L A E L E N K K G E L E A L S T I G E E E V -C Y I Y N V D S K S E I V K I L S N E I E V L E R E (60)
M E + + E EL E+ ++ + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L --E I L -S -P M Y T A V M V T Y D L I G K Q L A S R R A E
ivig_359_CDS_0074 V E Y L T -P L D W S -N D P A I E I F S S Y E A -M N S F L Y (92)
+ + A +
AcrIE6 L I E I L E E Q Y -P G H A -A --D L ---S -I -K N L C P
ivig_359_CDS_0074 2 AcrIF2-IC2 0.57 View Alignment ivig_359_CDS_0074 M -A R S ---Y E T A L A E L E N K K G E L E A -L -S T I G -----E E E -V C Y I -Y N V D ---S K ----S (60)
M ++ + + +E I + E D
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E -A -I -A I A K D Q V W D G E G -Y T K Y T F D D N S V L -I Q S G -
ivig_359_CDS_0074 E -I V -K I L S N E I E V L E R E V E Y L T P L D W S N D P A I E -I -F -S S -Y E A M N S F --L Y (113)
+++ + ++ L + + S
AcrIF2-IC2 T T Q -Y A M D A D D A D S I K G Y A D W L D D E A R -S -A ---E -A -S -E I E R L L E S V E E -E
ivig_359_CDS_0074 3 AcrIE1 0.55 View Alignment ivig_359_CDS_0074 M A -R ---S Y E T ---A ----L --------A -E -L -E ----N K K G E L E A L S T -I -G -E E E V C (60)
M + A +E LS E+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y -P D L R E S L E -E -A -A -S I L S L I V F Q A E T L S -D -Q -A -N E L A
ivig_359_CDS_0074 Y I Y N V D S K S E I V K I L S N E I E V L E R E V E Y L T P L D W S N -D P A I E I F S S Y E A M N S F L Y (115)
E + + I++ + N I + A +
AcrIE1 N Y I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G --E V N Q -H G I R V Y G D --A I D R D V D
ivig_359_CDS_0074 4 AcrIF23 0.54 View Alignment ivig_359_CDS_0074 M A R ---S Y E -T -----A -----------L A E L E ---------------------------(60)
M + +
AcrIF23 M T N F Q T W L -D -S A D I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
ivig_359_CDS_0074 --------N K K -G E L -E -A L -S T I G E E E V C Y I Y N V D S K S E I V K I L S N E -I E V L E R E V E -Y (120)
I E V N E + L +
AcrIF23 T F G G R A L T G T -A R Q -K -E -W A E K I R A E K V -Q Q M N Q -D Q A E M A C D ----P -S G L L T A A K F -
ivig_359_CDS_0074 L T -P L D W -S ----N --D P A ----I E I -------F ---S ------S ----Y E A M N S F -L Y (179)
+ Y A +
AcrIF23 W I E N ---R -N D S A Q E I A G F V M Q Q K A -L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
ivig_359_CDS_0074 5 AcrIIC4 0.53 View Alignment ivig_359_CDS_0074 M A -R --S Y E T A L A E L E N K K G E L E A L S T I G E E E V C Y I Y N V D S K S E I V K -I L S -N E I -E V L E (60)
M + + + + LS + + I + + + E
AcrIIC4 M K I T S S N ---F A T -I A T S E N -F A K L S V L P K N H ---------R E P I K -G L F -K S -A V E Q -F
ivig_359_CDS_0074 -R E V E Y L T P ----L -D -W S ----N -D P A ----I E I F S S -Y -E -A M N S ---F -L Y (114)
+ + A +E + +
AcrIIC4 S S A R D F F K N E N Y S K E -L -A E K F N -K E -A V N E A V E K L Q K A -I -D L A E K Q G I -Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;