3D Structure for ivig_3159_CDS_0044 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_3159_CDS_0044 1 AcrIE6 0.70 View Alignment ivig_3159_CDS_0044 V T E K T L E Q A I E I K H I L D N L R K R K K E L E D T R D L C F G N T -R E V R A -R T I Y V E I S E N G C C K K -(60)
+ + K E D I S
AcrIE6 M N -N D ---T E V L E Q Q -------I K A F E L L A D E L K D R L P -T ---L -E I --L -S P M ---Y -T
ivig_3159_CDS_0044 S T I I S P -Q A -A -K E A L E C E L L D A D E K -L N K ---F L ----N -A L S -E L -V (109)
+ + +++ L+ + + L
AcrIE6 ---A V -M -V T -Y -D L I G K Q L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
ivig_3159_CDS_0044 2 AcrIE1 0.63 View Alignment ivig_3159_CDS_0044 V T ---E K ---T L E ----Q A I E I K H I L D N L R K R K K E L E D T R D L C F G N T R E V R A R T I -Y V E I (60)
L +++ L+ + + + + + E+ I
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N -Y I R ----
ivig_3159_CDS_0044 S E N G C C K K S T I I S P Q A A K E A L E C E L L D A D E K ----L N K F L -N A L S E L -V (109)
+ ++ +++ + A+
AcrIE1 R ----Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
ivig_3159_CDS_0044 3 AcrIF23 0.62 View Alignment ivig_3159_CDS_0044 V -T -E K T L E ---Q ----A I E ---------I K -----------------------------(60)
+ L+ +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G -Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
ivig_3159_CDS_0044 --------H -I ----L D N L R K R ----K K E L E D T R D L C F G N T R E V R A -R T I Y V E -I -S E N G (120)
++ +R N
AcrIF23 G G R A L T G T A R -Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L --T -A A K -F -W I -E --N R
ivig_3159_CDS_0044 C C K K S T I I S P Q A A K E A L E C E L L D A --------D E K -L -N -K -F L N -A L S E L --V (174)
+ I+ AL A K N L+
AcrIF23 N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A -A -E -Y N A -L T A R W G F
ivig_3159_CDS_0044 4 AcrIIC4 0.58 View Alignment ivig_3159_CDS_0044 V T E K --T L E Q ---------A I -E I ----K H I L D N L R K R K -K E L E -D T R -D L C F G N T R E V R (60)
+ + + + + + L K D F N
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q -F S S -A R D -F F K N E N ---
ivig_3159_CDS_0044 A R T I Y V E I S E N G C C K -K S T I I S P Q A A K E A L E C E L L D A D E K L N K F L N A L S E L V (112)
K + KEA+ + + +
AcrIIC4 ---Y ---------S K E ----L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I -Q F
ivig_3159_CDS_0044 5 AcrIC3 0.58 View Alignment ivig_3159_CDS_0044 V T -E K --T L E Q A I -------E I K ---H I L D N L R K -R K K E L E D -T R D L C -F -G N T R E V R -A (60)
+ T + + + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K ----T D R G -L E S R F -L V P E A --G N -
ivig_3159_CDS_0044 R T I Y V E I S E N G C C K K S T I I S P Q A A K E A L E C E L L D A ---D E K L N K F L N A L S E -L -V (115)
R I V ++ + +A+ L + L ++ L
AcrIC3 R R I E V A L T -G -----R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;