3D Structure for ivig_3159_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_3159_CDS_0038 1 AcrIIA27 0.77 View Alignment ivig_3159_CDS_0038 M -K Y T V H Y E S --K -P G -M W E L H -G G T K T V E A N S E E E A I D K A Y K L I K R D -F -----F ----(60)
M ++ EL VEA + EA KA
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
ivig_3159_CDS_0038 D ---R -P -R -S -G -W H F S -V -N (82)
R
AcrIIA27 I D N T -H -R R A W G -R R Y L R V E E A
ivig_3159_CDS_0038 2 AcrIE2 0.72 View Alignment ivig_3159_CDS_0038 M K Y -T V H Y -E S K P G M W ---E L -H G G T K T V E A N S -E E E -A I D -K A Y K L I K R -D F -----F -(60)
M + E + A A +
AcrIE2 M N T Y L I D -P R K -N -N D N S G E R F T V D A V D I T A -A A K S -A A Q -Q I L G E E F E -G L -V Y R E T G E
ivig_3159_CDS_0038 ---D -R -----P --R ---------S -G -W -H F -S V -N (97)
G F
AcrIE2 S N G -S G M F Q A Y -H H L H G T N R T E T T -V G Y -P -F H V M E L
ivig_3159_CDS_0038 3 AcrIC9 0.63 View Alignment ivig_3159_CDS_0038 M -K --Y T V H Y E S K P G M W E L H G G T K T V E A N S E E E A I D K A Y K L I K R ----D F ----------(60)
M + + ++ ++ + R
AcrIC9 M E T K M T S F Y K I T A Y ---N --S Q A L Y -F W G T D A D V D R Y -V D W L N R D R E I N V Y A A E A I P E A E
ivig_3159_CDS_0038 F D R P ------R ----S -G W -H F --S V --N (89)
+ GW S
AcrIC9 W A Q Y E G R D D V L S G E E -C G W D D -F M S -A E A
ivig_3159_CDS_0038 4 AcrIF9 0.57 View Alignment ivig_3159_CDS_0038 M -K Y -T V H Y E S K P G M W E L H G G T K T V E A N S E E E A I D K A Y K L I K R D F F D R P R S G W H F S --V -(60)
M ++ E + ++EA+S A A K + G
AcrIF9 M K A A Y I I K -E V Q -N I N S E R -E G T Q I E A T S L S Q A K R I A S K E -Q ---C F --H -G T V M R I E T V
ivig_3159_CDS_0038 -----------------N (78)
+
AcrIF9 N G L W L A Y K E D G K R W V D C Q
ivig_3159_CDS_0038 5 AcrIF19 0.57 View Alignment ivig_3159_CDS_0038 M -K Y T -V H Y ---------E -S -K -P G M W E L H G G T K -T V E -A ------N ------------(60)
M Y
AcrIF19 M K P L H T M N Y D N N Q M S L V Y -E -S Y D E -Y G F E Y S V K L K I S V R D Y R G I D V -S A F N A F P E W E D T
ivig_3159_CDS_0038 --------S E E E A I D K A Y K L I K R D F F D R P R S G W H F S -V N (99)
S EE+ K F P
AcrIF19 L R M R D R V M S V E E I E N A M I S R Y K S L F I A -P P D C T -Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;