3D Structure for ivig_3049_CDS_0045 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_3049_CDS_0045 1 AcrIF11 0.73 View Alignment ivig_3049_CDS_0045 M -I I -T H A S S E R I T E V K A R S P Y A M -F L K G C L F F A S E G N E -Y N L A G E C N Y Q Y N L E V N N I I E (60)
M H S E I+E++ G LF A E + ++
AcrIF11 M S M E L F H G S Y E E I S E I R D S ---G -V -F G G -L F G A H E K E T A L S H -----------G E T L H R
ivig_3049_CDS_0045 V E S F F T H -H D M S E S A V L E V I E M V R D D L E L D L D N D -E I A G L L D N S K S I R D V D F S G Y D D -A G (120)
+ S + + E + D + D + +
AcrIF11 I I S P L P L T D Y A L N Y E I E S A W E V A L D V A -G -G D E -N V A E A I M A K A C E S ----------D -S
ivig_3049_CDS_0045 E A D W A I -Q -Q F Q G I L A H K L G Y D C A K S S D E Q G T V Y I A Y C V -G R E M Q E V K C (169)
W + G+LA +LGY + DE GT + G
AcrIF11 N D G W E L Q -R -L R G V L A V R L G Y T S V E M E D E H G T T -W L C L -P G C T V E K --I
ivig_3049_CDS_0045 2 AcrIB8 0.50 View Alignment ivig_3049_CDS_0045 M I -I T H -A S -S E R ----I ----T E -V K A R S -P Y -A -M F L K G C L F F A S E G N E Y N L A G E C N Y (60)
M I + + + F G+ +L
AcrIB8 M K T I D R D E -I A K D I N A C -I K G L G R D I -R T N W -E L -G -F E E --------G Q I I T L -E R Y E S
ivig_3049_CDS_0045 Q Y N L E V N N I I E -V E -S F F T H H D M S E S A V L E V I E M V R D D L E L D L D N D E I A G L L D N -----S (120)
+ F +
AcrIB8 W -T T -------G G -D -F T V --------------------------C N D C P V E Y H F E I E N E
ivig_3049_CDS_0045 K S I R D -V D F S G Y D D A G -----E A D W -A I Q Q F Q G I L A H K L G Y D --C A K S -----S D E Q G -T (180)
+ Y A + +L+ +G + ++E G
AcrIB8 V P C H -V ---V D Y N N K E E V I A L G A -E D C -E D E N E V L L P -A G T K L E V V Y G E H E D D N E E M G F Y
ivig_3049_CDS_0045 V Y I A Y C V G R E M Q E V K C (196)
++ + E
AcrIB8 -T V I F ---K Y L E E E -K
ivig_3049_CDS_0045 3 AcrIF25 0.41 View Alignment ivig_3049_CDS_0045 M I -I T H A S S E R I T -E V K A -R -S P -Y A M F ----L K G C L F F -A -S -E G N E Y N L -A G -E -C N Y (60)
M R + +
AcrIF25 M D N D D ---K K P D -A L -I H L R V P A E V K G R W V K E S R L E G M K L -T -D W I T G ---R -V E A K ---
ivig_3049_CDS_0045 Q Y N L E V N N I I E ---V ----E S F -F -T H H D -M S E S A V L E V I E M V R D D L E L D L D N D E I A G L -(120)
+ +I+E + ++ I
AcrIF25 -----A L S I A E V L E E A A A M A R S L -E D S P I F Y R N K L C A D G I V -----------------T I
ivig_3049_CDS_0045 L D N -S K S I R D V D F S G Y D D A G E A D W A I Q Q F Q G I L A H K L G Y D C A K S S D ---------E -Q G T (180)
+ + A + A + GY + S T
AcrIF25 -Q Q Q A A R F S A A --------T -D -D A T R L D A A L W A -R E G Y Q L L S S G L P D S Y S G A V P N E G R T
ivig_3049_CDS_0045 V Y I A Y -C V -------G -------R E M Q -E ---V K C (215)
+ E
AcrIF25 G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
ivig_3049_CDS_0045 4 AcrIIA33 0.41 View Alignment ivig_3049_CDS_0045 M I I T -H A S -S E R -I T E V K A R S P Y A M F L K G C L F F A S E G N E Y N L A G E C N Y Q Y N L E V N N I I E V (60)
MI S I + +
AcrIIA33 M I K W T G K S T D K G W I R T -V E A -E ---------------------------------T Y Y K L
ivig_3049_CDS_0045 E S F F T H H D M S E S A V L E V I E -M -V R D D L E L -D L D -N D -E I A G L L D -N S K S I R D V D F S -G Y -(120)
+ + + L +
AcrIIA33 L E T L V D K ----------G -Y -I -G ---D Y I -D S D S -Q L F H E L -A Y V -S P A V A D L E -D R L N
ivig_3049_CDS_0045 --D D -A G E A -D -----W A I -Q Q F Q G I L A -H K L G Y D C A K S S D E Q G T V -Y I A Y C V G R E M Q E V (180)
A + + L + + ++ E +
AcrIIA33 D E H Q V -E Q A L -E D L E N F D -W N R V F E K L T D -Q Q F Q T A I A G -C -T S Q A Y ------Y Q E F E V I
ivig_3049_CDS_0045 K C (182)
AcrIIA33 -E
ivig_3049_CDS_0045 5 AcrIF3 0.40 View Alignment ivig_3049_CDS_0045 M I I T H A S S E R I T E V K A ---R S P Y A M F -L K G C L F F A S E G N E Y N L A G E C N Y -Q Y N L E V N N I I (60)
M + +S + + F++ + NL ++++
AcrIF3 M S -S T I S D R ------I I S R S ----V -I E A --A R F I Q S W E D ------A -D P -D N L T E S Q V L
ivig_3049_CDS_0045 E V E S F F T H H D M S E S -A V L E V I E M V R D D L E L D L D N D E I A G L L D N S K S I R D V D F S -----G -(120)
+ SF + + V+ + + ++ +
AcrIF3 A A S S F A A --R L -H E G L Q A T V L Q R L ----V D E S N ----R D E Y R E F Q A W E E A L L N A D G R V T S
ivig_3049_CDS_0045 --Y D D A G E A D W A I Q Q F Q G I L A H K L G Y D C A K S S D -E -Q G T V Y I A Y C V ---G R -E -M Q -E V K (180)
D G +++ + +G G A +
AcrIF3 N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G S --H V -H -G -R L M A I F Q D R F Q -Q -H Y -E D E E
ivig_3049_CDS_0045 C (181)
C
AcrIF3 C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;