3D Structure for ivig_3020_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.79 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_3020_CDS_0037 1 AcrIE6 0.72 View Alignment ivig_3020_CDS_0037 M R -T E T E ---I R D K L K E Y E E N -I -K -F L E T S L ---K ----N K ----I -I -I Q -E -L K R E T (60)
M + L T L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L -K -D R L P T L E I L S P M Y T A V M V T Y D -L -I G -K -Q L A S R R
ivig_3020_CDS_0037 I I L K W V ----L ----G -E I -K --K -I (86)
+ L + ++
AcrIE6 A E L I E I L E E Q -Y P G H A A D L S I K N L C P
ivig_3020_CDS_0037 2 AcrIIC4 0.55 View Alignment ivig_3020_CDS_0037 M R -T E T E I R D -----------------------K -L K E Y E E N I K F L E T S L --------K N (60)
M+ T + K E+ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L F K S A V E Q F S S A R D F F K N E N Y S K E L A
ivig_3020_CDS_0037 -K I I I Q -E L K R E T I I L K W V L G E I ---K -K I (90)
+ L ++ +
AcrIIC4 E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
ivig_3020_CDS_0037 3 AcrIF25 0.54 View Alignment ivig_3020_CDS_0037 M R -------------T E T E I R ----D --------------------K -L K E -Y ----E E N (60)
M E++ + E
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V -K E S R L E G M K L T D W I T G R V E A -K A L -S -I A E V L E E
ivig_3020_CDS_0037 I K F L E -T S L ---------------------------------------------------(120)
+ +
AcrIF25 A A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G
ivig_3020_CDS_0037 ------------K --N K ---I I I Q E -L K R ---E T I I L K W V L G E I -K K --I (170)
LG + K
AcrIF25 L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
ivig_3020_CDS_0037 4 AcrIF23 0.54 View Alignment ivig_3020_CDS_0037 M R T E T -E ---I -R ---------------------------------------------D -(60)
M + +
AcrIF23 M T N F Q T W L D S -A -D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
ivig_3020_CDS_0037 ---------------------K L -K E Y E E N I K F L E T -S L --------------------- (120)
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C D P S G L L T A A K F W I E N R N D S A Q E I
ivig_3020_CDS_0037 ----K N K I -I -I -Q -E L K ---------R -E T I I L K W V L G E I K -K --I (167)
+ + + + +
AcrIF23 A G F V M Q Q K A -L -L -A Q H -R S A K A A G Q A -D K V A K I A A E Y N A L T A R W G F
ivig_3020_CDS_0037 5 AcrIIA28 0.52 View Alignment ivig_3020_CDS_0037 M R ------T E T E I R ---------D -K -L -K E Y E E N I K F L E T S L -----------------(60)
M+ + E+ +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K -E -L -F N S M H D F R S Q H A K E -A R I P G W S D K Y N K L E K K M
ivig_3020_CDS_0037 -K N -K I I I Q E ----L K R E -T I I L K W V L G E I K -K I (94)
+ L +I +
AcrIIA28 L S D F E E V T G I K Y D T L E S -E -L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;