3D Structure for ivig_3020_CDS_0031 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.61 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_3020_CDS_0031 1 AcrIE6 0.76 View Alignment ivig_3020_CDS_0031 M K -T Q E E I L S K I K E L E N D I K P I K N I M E N S -T ---N ----Y K M K I D Y L K S I F K I Q R E ----(60)
M +E + + IK E + +K + K++ E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
ivig_3020_CDS_0031 I D L L N ----W -V -L ---E R (79)
++ + +
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
ivig_3020_CDS_0031 2 AcrIIC4 0.61 View Alignment ivig_3020_CDS_0031 M K -T Q E E I L ---------S -----------K I ----K E L E N D I K P I K N I M E N S T -----N (60)
MK T+ + I K + ++ N +
AcrIIC4 M K I T S S N F A T I A T S E N F A -K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
ivig_3020_CDS_0031 -Y K M K I -D Y -L -K S I -F K -I Q R E I D L L N W V L E -R (94)
K + +Q+ IDL+
AcrIIC4 E -K F N K E -A V -N -E A V E -K L Q K A I D L A E K Q G I Q F
ivig_3020_CDS_0031 3 AcrIF23 0.59 View Alignment ivig_3020_CDS_0031 M K T Q E -E I L ---------------------------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
ivig_3020_CDS_0031 ------------------S K I -----------K E L E N D -I K -P I K -N I M E N S T ------- (120)
+ + EN +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L T A A -K F W I E N R N D S A Q E I A
ivig_3020_CDS_0031 N -Y -K M K I D Y L K --------S ----I F K I Q R E I D L L N W V L E -R (163)
L + KI E +L+
AcrIF23 G F -V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G F
ivig_3020_CDS_0031 4 AcrIE1 0.58 View Alignment ivig_3020_CDS_0031 M -K ----T Q E E I L ----------S ----K -I --------K -E -L -E N ----D I K P I K N I M (60)
M K Q ++ + + N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A S I L S L I V -F -Q -A -E T L S D Q A N E L A N Y I
ivig_3020_CDS_0031 E N -S T N Y K M K I D Y L K S I F K I Q R E I D L L N -W V -----------L --E --R (109)
+ ++I + V
AcrIE1 R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A -I D R D V D
ivig_3020_CDS_0031 5 AcrIIA28 0.53 View Alignment ivig_3020_CDS_0031 M K ------T Q E E I L -S K --------I -K E L E N D I K P I K N I M E N S T ----N Y K M K I D Y L K S (60)
MK ++EE+L K L
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L -F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D
ivig_3020_CDS_0031 I F K I -Q R E ---------I -D -L -L N W V L E -R (91)
+ N L
AcrIIA28 F E E V T G I K Y D T L E S E L I W D -N -L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;