3D Structure for ivig_2853_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 93.71 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_2853_CDS_0009 1 AcrIIA7 0.88 View Alignment ivig_2853_CDS_0009 M K S Y I G T K Q I N A T P M T R E -Q Y N N I R G W A V P S D E N P E D T G Y L V E Y P D S A S N C E G Y A G Y I S W (60)
M +
AcrIIA7 M T -F G --Q A L ---E S L -K R -----------------------------------------
ivig_2853_CDS_0009 S P Q A V F E K S Y M P T D G L T F G L A L D A V N L G K R I S R K G W N G K G L Y V S I W H C -D -----E ----(120)
+ + RKGWNGKG + D
AcrIIA7 ----------G -----------------H L V A R K G W N G K G -M F I F M R P E D S L P T N M I V N Q
ivig_2853_CDS_0009 -----------------I -------S H S M -L L I C N -N N I M S T W V P S S T D L F A F D W M I V E (179)
+I + W+ S+TD A DW IVE
AcrIIA7 V K S L P E S F K R W V A N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
ivig_2853_CDS_0009 2 AcrIE9 0.81 View Alignment ivig_2853_CDS_0009 M K S Y I G -T K Q I N A T P M T R E Q -Y N N I R G W A V P S D E N P E D T G Y L V E Y P D S A S N C E G Y A G Y I S (60)
M I K
AcrIE9 M E M Q I N S R K -----------L ---------------------------------------
ivig_2853_CDS_0009 W S P Q A V F E K S Y M P T D G L T F G L A L D A V N L G K R I S R K G W N G K G L Y -V S I W H C D E I S H S M L -L (120)
G+ I+ G L
AcrIE9 ----------------------------G R T I T F S R P -G -A S -Y -I F A D L N -G K S G T L G -
ivig_2853_CDS_0009 I C ---N -N N I M S T W V -P S --S ----T D L F -A -F --D W M -I V E (162)
M + + + + E
AcrIE9 C Q I C S -G G G T M G S T L S Y D G D D Q A Q F E A I -C R R W Y R A H -V R G E
ivig_2853_CDS_0009 3 AcrIIA4 0.80 View Alignment ivig_2853_CDS_0009 M K S Y I G T K Q I N -A -T P M T R E Q Y N N I R G W -A V P S D E N P E D T G -Y L -V E Y P D S A S N C E G Y A G (60)
M S
AcrIIA4 M N -I -N -D ---L -I --------R E ----I -K N ------K D -Y T -V K L S G T D -S --N S I T Q
ivig_2853_CDS_0009 Y I S W S -P -Q A --V F E K S Y M P T D G L T F G L A L D A V N L G K R I S R K G W N G K G L Y V S I W H C D E I S (120)
I V S + A G
AcrIIA4 L I I R V N N D G N E Y V I S E S ---E N E S I V E K F I S A F K N G W ---N Q E Y E D E E E ------F Y N D M
ivig_2853_CDS_0009 H S M L L I C N N N I M S T -W V P S S T D L F A F D W M -I V E (153)
+ + +
AcrIIA4 ---------Q T ---I -T L -K S --------E -L N
ivig_2853_CDS_0009 4 AcrIIA34 0.79 View Alignment ivig_2853_CDS_0009 M K S Y I G T K Q ----I ---N A -T -P M T R E Q -Y N N I R G W A V P S D E N P E D T G Y L V E Y P -D S A S N (60)
MK+ + T + + + E L++ A +
AcrIIA34 M K N I -A N E I K T I R Y A F E D -G -R -S T Q K S I M R -K I K A L T D ---Q F E T M D D L I D S L N S Y A D T
ivig_2853_CDS_0009 C E G Y A G Y I S W S P Q A V F E K S Y M P T D -G -L T F G L A L D A V N L G K R I S R K G W N G -K G L Y V S I -W (120)
+ T +++
AcrIIA34 ---H Y T W A I -------------T -Y -F Q L A R I I I S F Q A S N N T T -------S -E K K ---I -
ivig_2853_CDS_0009 H C D E -I S H S M L L I C N N N I M S T W V P -S ----S -T D L F ---A ----F -D -W M I V E (173)
D + + + N + + +
AcrIIA34 --D -L -Q S G P I E V -N G K L K I R V T V D E F M A D -L A N -W E H L -E D I K K L -A -K E L A
ivig_2853_CDS_0009 5 AcrIF21 0.79 View Alignment ivig_2853_CDS_0009 M K S Y I ---G -T K Q I N A T P M T R E Q Y N N I R G W A V P S D E -N ---P E D T G Y L V E Y P D S A S N C E G (60)
M S +++++ + I ++ + ++ S ++
AcrIF21 M T S I K T I E Y K G N T L T L Q K D S --D A D C I S Y E I L L -R D P I K H W V G R D V Q I L N I D -S S T S ---
ivig_2853_CDS_0009 Y A G Y I S -W -S P ----Q A V F E K S Y M P T D -G -L -T F G L A L D A V N L G K R I S R ---K G -W -N G -(120)
+ Y + ++ +G ++ +G
AcrIF21 V D V F Y K K -F -S D S E L A S M M Q R E Y D D C F P -L -Q V T A T L E S V I E A G D I N T K W F V V N D -E T G A
ivig_2853_CDS_0009 K G L Y V S I W H C D E -I S H S M L L I C N N N -I M S T W V -----P -S ----S -T D L -F --A -F D W M I (180)
+ + + + S
AcrIF21 L S G K ---Y G S V Y T -E S G W Y I C N E S G E K I E N K L T E N Q I -S S I R V A -M D R -G -D T -A T Y S W E
ivig_2853_CDS_0009 V -E (183)
+
AcrIF21 F D D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;