3D Structure for ivig_1850_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.89 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_1850_CDS_0016 1 AcrIE1 0.71 View Alignment ivig_1850_CDS_0016 M -D ---C -K D C -L -L R ------E -N -------R R -L I D -------E L I R A ----K E Y I K E (60)
M + + + L YI+
AcrIE1 M E K K L S D A Q V -A -L V A A W R K Y P D L -R E S L E E A A S I -L S L I V F Q A E T L S D Q A N E L A N Y I R R
ivig_1850_CDS_0016 L -E -L -------K I K -T F E E -M -N L K E C T E D -L F -------D S T V F R F -K (110)
I E + + R
AcrIE1 Q G -L E E A E G A C R N I -D I M R -A -K -W V E V C G -E V N Q H G I R V Y G D A I D R D V D
ivig_1850_CDS_0016 2 AcrIE6 0.60 View Alignment ivig_1850_CDS_0016 M D -C K D C L L R E N ---R ----R -L -I -D -E L ----------I -R A K E Y I K E L E L K I K T F E E (60)
M + L L + + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D -E -L -K -D R L P T L E I L S P M Y -T A V M V T Y D L I G K Q L A S R R A
ivig_1850_CDS_0016 M N L K E C T E D L F ----D S -T V F -R F -K (86)
+ E E+
AcrIE6 E L I -E I L E E Q Y P G H A A D L -S I K N L C P
ivig_1850_CDS_0016 3 AcrIC3 0.59 View Alignment ivig_1850_CDS_0016 M -D C K -D C L L --R --------E N -R ---------------R L I D ----E L ----------(60)
M ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V -A S S G Q V K F M A D K T D R G -L E S R F L V -P E A G N R R I E V
ivig_1850_CDS_0016 ---I R A K E Y I K E L E L K I K T F E E M N L K E C T E D ---L F D S T V F R F -K (105)
R E + L + E + E + +
AcrIC3 A L T G R D L E A A N A L F S E L A A S V E A T -N E M Y R E L D A E R A Q I N K A L E G
ivig_1850_CDS_0016 4 AcrIIA19 0.55 View Alignment ivig_1850_CDS_0016 M D C K D -C -L L R ---E N R ---------------R L I D E L I -R A K -E Y I K E L E L -----K -I (60)
M RLI E I E +L
AcrIIA19 M K L I V E -V E E T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T -K P Y E L R L D L S E R Y S N R -D -
ivig_1850_CDS_0016 -K T F E E -M N -L -K E C T E D ----L F ----------------------------------D - (120)
F M E + +
AcrIIA19 L I E F K -F M -L -I -E Y C K E A L Q D I -K E L A N S D E A Y E T D E A F E A V F R Q L F E E V I S N P D T V L K
ivig_1850_CDS_0016 ---S -T V F -R -F K (133)
S T F K
AcrIIA19 A F H S Y T S F L E E N K
ivig_1850_CDS_0016 5 AcrIIA11 0.54 View Alignment ivig_1850_CDS_0016 M D --C K D C L L R ---------E N R ---------R -L -I -D -E L I R A K E Y I K E L E L K I K T F E (60)
M R + + + +K
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W -F -C -D -D K A L A G R L A K I W G I L K G I T
ivig_1850_CDS_0016 E -----M N -L ---K -------E -C T E ---------D -L F ---------------------(120)
K +
AcrIIA11 S D Y I L D N -Y R V W F K N N C P M V G -P L Y D D V R F E P L D E -E Q -R D E L Y F G V A I D D K R R E K K Y V I
ivig_1850_CDS_0016 --------------------------------------------------------D --- (180)
AcrIIA11 F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N N K F A E I M Q R A
ivig_1850_CDS_0016 -S T V F R F --K (190)
++
AcrIIA11 D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;