3D Structure for ivig_1491_CDS_0126 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment ivig_1491_CDS_0126 1 AcrIIA27 0.73 View Alignment ivig_1491_CDS_0126 M K T Y C I T Y --H -------E --T -Y -A E N Y E V E A N S P D E A E Q I L R E R I A N G ---K ------(60)
MKT I Y VEA + EA +RE
AcrIIA27 M K T F N I I V S E S A N L K E H S -S E -L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W -K F N M R D
ivig_1491_CDS_0126 -E -S A -P E Q ----C -Q -D -S -W -C D I A E L (89)
+ E+
AcrIIA27 L -T A -I D N -T H R R A W -G -R -R -Y L R V E E A
ivig_1491_CDS_0126 2 AcrIE2 0.67 View Alignment ivig_1491_CDS_0126 M K T Y C I T Y H E T --Y -A E N Y E V E A N ----S P -D -E -A E -Q -I L R E ---R I -A -----N ---(60)
M TY I + + E V+A A IL E +
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D I T A A A K -S -A A -Q -Q I L G E E F E G L V -Y R E T G E S N G
ivig_1491_CDS_0126 -G K E S A P E Q C Q -D S --------W C D I A E L (89)
G +A + + EL
AcrIE2 S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
ivig_1491_CDS_0126 3 AcrIC9 0.63 View Alignment ivig_1491_CDS_0126 M -K ---T -Y -C I T Y H E T Y A E N Y E --V E A N S P D E A E Q I L R E R I A -N --------G K E S A -P (60)
M + IT + D L E
AcrIC9 M E T K M T S F -Y K I T A Y -N -S Q A L Y F W G T D A D V D R Y V D W L N R D R -E I N V Y A A E A I P -E A E W A
ivig_1491_CDS_0126 E Q C ---Q D S -W -C D I -A ----------E -L (90)
D +
AcrIC9 Q -Y E G R -D -D -V L S -G E E C G W D D F M S A -E A
ivig_1491_CDS_0126 4 AcrIE8 0.58 View Alignment ivig_1491_CDS_0126 M K T Y C I T Y H E T Y A E -N Y E V E A N S P D E A E Q I L R E -R I A N G K E S A P E Q C Q D S ----W ----C (60)
M T I+ E S +EA + K S + DS
AcrIE8 M T T I T I N -T -Y D P E A R ---F N M S G E E A K E F F -A F V E E Q A K V S G F D V Y Y D S C T Y V D E E S E R
ivig_1491_CDS_0126 D I ---A -E -L (70)
+
AcrIE8 F V E K C F Q -N Y
ivig_1491_CDS_0126 5 AcrIIC5 0.57 View Alignment ivig_1491_CDS_0126 M K ---T Y C I T Y H E T ------------------------Y ----A E N -Y E V E -A -N -S P D E (60)
M ++Y T E +
AcrIIC5 M N N S I K F H V S Y D G T A R A L F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S -W E E K L R -E -E N C A S
ivig_1491_CDS_0126 A E Q I L -R -E ------------------------------------------R I -A N G K E S (120)
+
AcrIIC5 V Q D W -V -E -K N Y T S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T -L E D D L -E
ivig_1491_CDS_0126 A -P E Q C Q D S -W --C D ---I -A E L (143)
E
AcrIIC5 E F -N K A K Q -Y -L Q K -F Y A -E C E N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;