3D Structure for OX241574_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 94.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OX241574_CDS_0038 1 AcrIIA20 0.88 View Alignment OX241574_CDS_0038 M M K V Y V -A L A G Y D Y E G Y -E -V V -G V -H S S R E L A E S C I D N L K N R P K V Y F D N ----------(60)
M V ++ E + + +D L Y N
AcrIIA20 M K N Y E -V --------T -N -E -V K -N L N T Q V E T I G Q A V D -L Y K E ---Y G S N T I V W S I D K N E
OX241574_CDS_0038 ------Y K I Q -E C -E I D G ---E (82)
+ E G
AcrIIA20 D L I D E V T E L V A E -Y A E K G T V I K
OX241574_CDS_0038 2 AcrIE8 0.87 View Alignment OX241574_CDS_0038 M M K V Y V A L A G Y D Y E G --Y E V V G V ----H S S R -E L A E S -C -I D N L K N R P K V Y F D N ------(60)
M + Y FD
AcrIE8 M -T T I T I N T -Y -D -P E A ----R -F N M S G E E A K -E F F A F -V E -E Q A K V S --G F D V Y Y D S C T
OX241574_CDS_0038 ----Y K I Q -E C -E I ----D G E (81)
AcrIE8 Y V D E E -S -E R -F V -E K C F Q N Y
OX241574_CDS_0038 3 AcrIF18 0.85 View Alignment OX241574_CDS_0038 M M K V Y V A L --A G -Y D Y E G Y E -V ---------V G V -H S S R E L A E -S C I D N L K N -R P K V Y F D (60)
M + +A +G G E + D
AcrIF18 M T T I K A A Y I S K D Q N W N D G T -T T Y W F D V N G E T F G -V V H G G E S W N A K V ----V D C -D G A P S D
OX241574_CDS_0038 N Y K I Q E C E I ---D -G -E (77)
+Y + I E
AcrIF18 Q Y T V D Q F N I T E D M I -A E
OX241574_CDS_0038 4 AcrIC9 0.84 View Alignment OX241574_CDS_0038 M M ---K -V Y V A L A G Y D Y E G Y E V V G V H S S R E L A E S C I D N L K N R P K V Y F D N ---Y K -I -Q -E (60)
M Y + A Y ++ + ++ +D L E
AcrIC9 M E T K M T S F Y K I T A -Y -N -S -Q A L Y F W G T D A D V D R Y V D W L N R D R E --I N V Y A A E -A -I -P E
OX241574_CDS_0038 C -E ---I -------------------D ---G -E (93)
AcrIC9 -A -E W A -Q Y E G R D D V L S G E E C G W D D F -M S A -E A
OX241574_CDS_0038 5 AcrVIA2 0.84 View Alignment OX241574_CDS_0038 M M K V Y V A L A G -----Y -D -Y E -G ----------Y -E V -V -G V H S S R E L A E S C I D N L K N R P (60)
M K E E + N
AcrVIA2 M W K C K K C G C D R F Y Q D -I -T G -G -I S E V L E M D K D -G E -V -L D E I D D V E Y G D F S C A K C D N --
OX241574_CDS_0038 K V -Y F D N -Y K -I Q E C E -I --D -------G -E (91)
I +
AcrVIA2 --S -S S K I Q -E I A Y W D E -I N G K N K T Y L S K D K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;