3D Structure for OQ319121_CDS_0109 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.10 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OQ319121_CDS_0109 1 AcrIE1 0.71 View Alignment OQ319121_CDS_0109 M -K ----N K D R F ---D --------S ----I S Q R L D E I E G L I Y E L -------K --------(60)
M K + + L I + L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L
OQ319121_CDS_0109 G ---A M -L V -------L -Q -C -R -V -D -Q -Y -N -E -S T D -L -R -M -S K H D D -S -S -K (117)
AcrIE1 E E A E G A C -R N I D I M R A K W -V -E -V -C -G -E -V -N -Q -H G I -R -V -Y G D A I -D -R D V D
OQ319121_CDS_0109 2 AcrIE6 0.62 View Alignment OQ319121_CDS_0109 M K N -K D R F D S I S Q R L D E I E G ----L I Y E L --------------K G A ----M L V L Q C R V D Q (60)
M N + ++ + + + + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
OQ319121_CDS_0109 Y N E -S -T D L R M S K H D D S --S -K (82)
E +
AcrIE6 I L E E -Q Y P G H A A -D L S I K N L C P
OQ319121_CDS_0109 3 AcrIC3 0.59 View Alignment OQ319121_CDS_0109 M K -N K -D R F -D --S ----I -S -Q R L D E I E G -------L I ---------------------(60)
M + + + G
AcrIC3 M S I Q V T S T N G R T V N L E I E -L -G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A
OQ319121_CDS_0109 --Y E L ----K -G -A -M -L V L Q C R V D Q Y N E S ----T D L R M S K H D D S S -K (108)
L V+ NE D+
AcrIC3 L T G R D L E A A -N -A -L -F S E L A A S V E A T N E -M Y R E L D A E R A Q I N K A L E G
OQ319121_CDS_0109 4 AcrIF23 0.57 View Alignment OQ319121_CDS_0109 M -K N K D R F ---D S I ---S Q ----R -L -D E I E G -L I Y E L ----------------------(60)
M D + + Y
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E -T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
OQ319121_CDS_0109 ----------------------------------K ----G A -M L -V -L -Q -C -R V D Q Y N E (120)
L +++ N+
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A C D P S G L -L T -A -A -K -F W I E N R N D
OQ319121_CDS_0109 S T D -------L -------R M -------------S ---K -H -D D S S ----K (170)
S +
AcrIF23 S A -Q E I A G F V M Q Q K A L L A Q -H R S A K A A G Q A D K V A K I A A E -Y N A L T A R W G F
OQ319121_CDS_0109 5 AcrIIA19 0.54 View Alignment OQ319121_CDS_0109 M K N -K D R F ----D ----S ----I S --------Q -R -L -D E I E G L I Y E L -K ----------(60)
MK + + + E YEL
AcrIIA19 M K L I V E V E E T N Y -K N L V N Y T K L T N E S H N I L V N -R -L -I S E Y I T K P Y E L R L D L S E R Y S N R D
OQ319121_CDS_0109 --G -A -M -L V -L Q C R V D Q Y N E S -T D ------------------------L R -M ------- (120)
L
AcrIIA19 L I -E -F -K F -M L I E Y C K E A L Q -D I K E L A N S D E A Y E T D E A F E A V F R Q L F E E -V -I S N P D T V
OQ319121_CDS_0109 ----S ----K H D D S S K (136)
+ +K
AcrIIA19 L K A F -H S Y T S F L E E N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;