3D Structure for OP617743_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 95.76 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OP617743_CDS_0028 1 AcrIF2-IC2 0.83 View Alignment OP617743_CDS_0028 M N -N I L I E K R A E L L E V K Q A I Y -A K Q R E -I -R N F -S Y E -S T D D E Y D S Y L D -G C Y G D L D V C G (60)
M + + A + D +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A --A --E A I -A I A K D -Q V W D G ------E G --------Y -
OP617743_CDS_0028 S T F S -A S Y -A -L K N L D P T A Y R C G K S D Y D S E K D L D D V P E Y V T L M E E L E E L E D K E T -D L E N E (120)
+ D+ + ++ ++ L+D +E
AcrIF2-IC2 ---T K -Y T F -D ---D -N -S V L I Q S G T T Q Y A M D A ---D D A D S I K G Y A D W L D D E A R S A E A S E
OP617743_CDS_0028 I E E L -E V S E -E (131)
IE L E E E
AcrIF2-IC2 I E R L L E S V E E E
OP617743_CDS_0028 2 AcrIF2 0.83 View Alignment OP617743_CDS_0028 M -N N I L I E K R -A E L L E V K Q A I Y A K Q R E -I R N F -S Y E -S T D D E Y D S Y L D -G C Y G D L D V C G S (60)
M + + + + A E I + D +
AcrIF2 M I A Q Q ---H -K D -T V A A C E A ----A -E A I A -I A K -D Q V W D G ------E G --------Y --
OP617743_CDS_0028 T F S A S Y -A L K N L D P T A Y R C G K S D Y D S E K D L D D V P E Y V T L M E E L E -E L E D K E T D -L E N -E I (120)
+ D+DD+ + L+ E+ E +E
AcrIF2 --T K Y T F -D --D -N -S V L I Q S G T T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E -R L -
OP617743_CDS_0028 -E E L E V S E E (129)
E +E E
AcrIF2 L E S V E -E -E
OP617743_CDS_0028 3 AcrIIC5 0.82 View Alignment OP617743_CDS_0028 M N N -I -L -I E -K R A E -L --L -E V K Q A I Y A K Q ------R E I R N F S --------Y E -S T D D E (60)
MNN I + K + E +
AcrIIC5 M N N S I K F H V S Y D G T -A R A L F N -T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K L R -E E N C A S
OP617743_CDS_0028 Y D S Y L D G -C Y -G D L D V C G S T F S A S Y A L K N L D P T A Y R C G -K S D Y D S E K D L D D V P E Y V T L M E (120)
++ Y F++ + + + + ++
AcrIIC5 V Q D W V E K N -Y T S ---S Y S D L F N I C E -I -E V S S A G Q L V -K I D N T E V D D F V E N C Y -G F ----
OP617743_CDS_0028 E L E E L E D K E T D L E N E I E E L E V S -E E (145)
LE+ + + + + + + E
AcrIIC5 T L E D D L E E F N K A K Q Y L Q K F Y A E C E N
OP617743_CDS_0028 4 AcrIC7 0.79 View Alignment OP617743_CDS_0028 M N N I L I E K R A E L L -E V -K Q A I Y A K Q R E I R N F S Y E S T D D E Y D -S Y L -D G C -Y -G D L D V C G S (60)
M + + NF E ++ + G
AcrIC7 M A T -V T K I ---T -L -N G --------Q N H Y N F G S E C S E ----A -D A E -G Y R -E ----W I A -
OP617743_CDS_0028 T F S A S Y A L K N L D P T A Y R C G K S D --Y D S E K D L D D V P E Y V T L M E E L E E L E D K E T -D L E N E I E (120)
+ ++ N D Y ++D + + +E+ L D + +
AcrIC7 ----Q E L A E N F P G A E I E I N E A D S T Y S V V V E I D ---D -E S Y Y D E A R G L K D D V N V F C I D A W D
OP617743_CDS_0028 E L E V -S E E (128)
AcrIC7 R C P W D W V S
OP617743_CDS_0028 5 AcrIIA33 0.79 View Alignment OP617743_CDS_0028 M N N I L I E ---K R A E L L E V ----K Q A I Y -A -K Q R -E I R N -F -S Y E S --T D D -E Y D S Y L D G C (60)
M + + V + +D L
AcrIIA33 M I K -W T G K S T D K G W I R T V E A E T Y Y K L L E -T -L V D -K G -Y -I G D -Y I D S D S Q L F -H E L A Y V
OP617743_CDS_0028 Y G D L D V C G S T F S A S Y A L K N L D P T -A Y R C G K S D Y D S ----E --K D L D D V P E Y V T L M -E E L E (120)
+ + + D
AcrIIA33 S P A V A D L E D R L N D E H Q V E ---Q A L -E D L E N F --D W N R V F -E K L -----------T D Q Q F Q
OP617743_CDS_0028 E L E D ---K E T D L E N -E -I E E L E V -S E E (147)
+ E E
AcrIIA33 T A I A G C T S Q -----A -Y Y Q E F -E V -I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;