3D Structure for OP455937_CDS_0055 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.85 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OP455937_CDS_0055 1 AcrIB1 0.85 View Alignment OP455937_CDS_0055 M I D Y E V Y S L G E L L D Q L N V E N V E E K L Q E E F K K F S C -P N E R D L E S F L V H K A I E Y Q R I Q F G K T (60)
M L LL F+ + D+E FL KAI + + T
AcrIB1 M E S K N ---L R K L L N E Y E E -I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T
OP455937_CDS_0055 F L F L N S K S L S N D I L D I M A F F T T G Q T -A I D I S ----D -L A Q K K K R K V V G S G I P G R D H M K S I (120)
+ + +I FT + ++ L +K+ S + +
AcrIB1 Y V V F S ---E ---D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T
OP455937_CDS_0055 P G F L I G Q I G R D E R Y -S H D D L S G E Q I L K E C Y K K I E E A R T I I G G N I I I L E C -R K K M F E L F Y E (180)
FL+GQ+G+ ++G +L Y ++ +I I LEC FY
AcrIB1 S S F L L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q
OP455937_CDS_0055 K Q G F K Q L L A A K -G D E L M K L Y K R I A (204)
GFK L + + L +
AcrIB1 N F G F K M L E S L T S E E G L K V M I M E L K
OP455937_CDS_0055 2 AcrVA5 0.57 View Alignment OP455937_CDS_0055 M I D Y E V Y S L G E L L D Q L N V E N -V E E K L Q E E F K K F S C P N E R D L E S F L V H K A I E Y Q R I Q F G K T (60)
M E+ G + +
AcrVA5 M -K I E L --S G ---G Y I C -Y S I -----------------E ---------------------
OP455937_CDS_0055 F L F L N S K S L S N D I L D I M A F F T T G Q T A I D I S D L A Q K K K R K V V G S G I P G R D H M K S I P G F L I G (120)
I
AcrVA5 -------------E ----------------------------------------D E V T I D
OP455937_CDS_0055 Q I G R D E R Y S -H D D L S G E Q I L K E C -Y -K K I E E A R T -I I G G N I I I L E C -R ------K K M F E L (180)
+ G + ++ +G I L
AcrVA5 M V E V T -T --K -R Q G I G S ----Q L I -D -M V K D V A R E -V G -L P I G L Y A Y P Q D D S I S Q E D L I E
OP455937_CDS_0055 F Y E K Q G F K Q L L A A K G D E L M K L Y K R I A (206)
FY + F + +
AcrVA5 F Y F S N D F E Y D P D D -V -D G R L M -R W -S
OP455937_CDS_0055 3 AcrVIA1_Lse 0.39 View Alignment OP455937_CDS_0055 M I -D -Y E V Y S L G E L L D Q L N V E N V E E K L Q E E F K K -F S C P N E R D L E S F L V H K A I E Y Q R I Q F G (60)
MI ++ G + ++L + E L KK R+ S + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S K Y N K W F E M W -K S P T S
OP455937_CDS_0055 K T F L F L N S K S L S N D I L D I M -A F F -T --T -G -Q T A I D I S D L A Q K K K R K V V G S G I P G R D H M K (120)
+ + + +
AcrVIA1_Lse S L V F W -K ------N -Y S F R C H L L F V I E K D -G E C L G I P A S V F E S V L Q I Y L A D -P F -A P -D T
OP455937_CDS_0055 S ------------I P G F L -I G Q I G R D E R Y S -H D D -----L S G E ---------Q I L -K E C Y (180)
+ + +E + + K
AcrVIA1_Lse K E L F V E V C N L Y E C L A D V T V V E H F E A E E S A W H K L -T H N E T E V -S K R V Y S K D D D E L -L K Y I P
OP455937_CDS_0055 K K I E -E A R T I I G G N I I I L E C R --------------K -----K -M F E L F Y E K Q G F -K Q L L A (240)
+ + F +
AcrVIA1_Lse E F L -D -T I A T N K K S Q -K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D -Y I F T E Y V S N L Y -R -E S A K
OP455937_CDS_0055 A K G D E L M K L Y K R I A (254)
+ L +
AcrVIA1_Lse L E Q H S K Q I L K E E L N
OP455937_CDS_0055 4 AcrIF16 0.38 View Alignment OP455937_CDS_0055 M I D Y E -V Y S L G E L L D Q L N V E N V E E K L Q -E E F -K -K -F S C P N E R D L E S F L V H K A -I E --Y Q (60)
M + + LD L + N+ L+ +L A
AcrIF16 M S L S D K K E Q K E A Y L D A L R -I -A P L D -R G -V L K -R -I -H A V N D N T L D K W L Y -V A D R Y P T F R
OP455937_CDS_0055 R ----I ---Q F G K T F L F L N S K S L S N D I L D I M A F F T T G Q T A I D I S D L A Q -K K K R K V V G S G I (120)
+ Q + L + + +
AcrIF16 -A C W E L W M F Q R K R R V L I ---------S R K L -H -----V L I ---N ----R -----------
OP455937_CDS_0055 P G R D H M K S I P G F L I G Q I G R D E R Y S H D D -L S G E Q I L -K -E C -Y -K K I E E A R T I -I -G G N I I (180)
I + Y ++ + + E N
AcrIF16 -----S ---T N R T I E A F E K T --Y P P E E R ----V -V G -K S -Y -R D L V T E K G E -R -S -A N M Y
OP455937_CDS_0055 I L E C -R ----------K ----K -M F E L F Y E K Q G F K Q L L A A K G -D E L M K L Y K R I -A (235)
I+ + + G + + K+
AcrIF16 I I N G E V V G A K D A S I L L G Y S S Y -N T L Y A K M K R L G I Q P G D D I S H L K P E K R G R K K E C S
OP455937_CDS_0055 5 AcrVA2 0.37 View Alignment OP455937_CDS_0055 M I -D ----Y E V ---Y ----S L G E -L -L D Q L N V E --N -------V E E K L Q E E ---F K K -F S (60)
M + L
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K -M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G
OP455937_CDS_0055 ---C ------------P -N ------E R D L E S F L V H K A ---I -E ----Y -Q R -I Q F G -K T F (120)
L+ +++ +
AcrVA2 G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S -I F -L N L P D W C V -
OP455937_CDS_0055 L -F L N S K S L S N -D ---I L -D -I -M A F F T T G Q T A I D I S D L A Q K K K R K V V G S G I P G R D H M K S (180)
++S ++ ++ F+ + + + + V+ +
AcrVA2 Y V D I S S A Q I -A T F D D G V A K -H -I K G F W A I Y D I V E M -N G I ----N H D V L D F V V D T D -T ---
OP455937_CDS_0055 I P -G -F -L I G Q I G R D E R Y S H -D D L S G E Q I L K E C Y K K I E E -A R T -I I G G N I I I -L E C R K K M (240)
+ G ++ + +
AcrVA2 D D N -V -Y V P Q P F I -L S ----S ----G ----Q S V A E V L D -Y G -A S -L F D ----D -D T S N T L
OP455937_CDS_0055 F E L F Y E K Q G F K Q --L -----L A --A K G ---------------------------------(300)
+ +
AcrVA2 I K G L L P Y L L W L C V A E P D I T Y K G L P V S -R E E L T R P K H S I N K K T G A F V T P S E P F I Y Q I G E R L
OP455937_CDS_0055 ------------------------------------------D -----E L -M --K L Y K R - (360)
R
AcrVA2 G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S G R V
OP455937_CDS_0055 I A (362)
AcrVA2 S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;