3D Structure for OP172807_CDS_0144 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OP172807_CDS_0144 1 AcrIE1 0.72 View Alignment OP172807_CDS_0144 M I K ---I -T T -A -I -A ------D -E -------L S S ----L M N D L D E I K V D R K E I T A T I D -(60)
M K + + + S + ++ + E+ I
AcrIE1 M E K K L S D A Q -V -A -L V A A W R K Y P D -L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R
OP172807_CDS_0144 N L K S Q I E E N E E D L L S L R Q E E L K K V E R V I E I E -R R L G ---I -N H G (104)
+ +E + R + V R G
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
OP172807_CDS_0144 2 AcrIE6 0.70 View Alignment OP172807_CDS_0144 M I K I T T A I A D E L S -S -L M N D L -D E I -K -V D -R K E I T A T I -D N L K S Q I E E N E E D L L S L R Q E (60)
M T ++ + + + L +
AcrIE6 M N N D T E V L E ----Q -Q -I K A F E L -L A -D E -L K D R L P T L -E I -L S P M Y T A V M V T Y D L I G K Q
OP172807_CDS_0144 E L K K V E R V -I E I E R R L ---G ----I -N H -G (90)
+ + + +E I N
AcrIE6 L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
OP172807_CDS_0144 3 AcrIC3 0.63 View Alignment OP172807_CDS_0144 M I K -I T T A I ----------A -D E ----L ----------S S -L M N -D L D E -I K V D R K E I T -(60)
M +T+ + + I
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G -S V V A S S G Q V K F M A D K T D R G -L E S R -F L V P E A G N R R I E V
OP172807_CDS_0144 A T I -D N L K -S Q I E E N E E D L L S L R Q E E L K K V E R V I E I E R R L -G -I N H G (107)
A + +L+ + + + G
AcrIC3 A L T G -R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N -K A L E G
OP172807_CDS_0144 4 AcrIF23 0.58 View Alignment OP172807_CDS_0144 M I K ---I T T A ------------I --------A ----------------------------(60)
M I
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
OP172807_CDS_0144 -D --------E --------L ------------S S L M N D L D E I K V D R K E I T A T I D N L K S Q I (120)
D + K + + I
AcrIF23 G G R A L T G T A R -Q K E W A E K I -R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
OP172807_CDS_0144 E E N E E D L L S L R Q E E --------L K -K V E R -V -I -E -I E R R L G I N -H G (167)
L + V + L +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I -A -A -E Y N A -L T A R W G F
OP172807_CDS_0144 5 AcrIIC4 0.54 View Alignment OP172807_CDS_0144 M I K I T T A I A D E ------------L S S L M N D L D E I K V -D R K -E I T A T I D N L K ---S Q I E -E (60)
M ++ A + + + + D K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S -A V E Q F S S A R D F F K N E N Y -S K E L
OP172807_CDS_0144 N -E E D L L -S L R Q E E L -K K V -E R V I E I E R R L G I N H G (95)
E + +E + K+ ++I++ + GI+
AcrIIC4 -A E K F N K E -A V N E A V E -K L Q -K A I D L A E K Q G I Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;