3D Structure for OP172782_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OP172782_CDS_0053 1 AcrIE6 0.75 View Alignment OP172782_CDS_0053 V K N K T F T E L A V M Y Q V T I E K L E R L D A K I S D C W D N -----G D K S S A K S L E C G M D Q Y L D T L Y E (60)
L + ++ L ++ + + + L E
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
OP172782_CDS_0053 I -E Q I L ---D -L R V ---D -F (80)
I E
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
OP172782_CDS_0053 2 AcrIE1 0.64 View Alignment OP172782_CDS_0053 V K --N -K ----T F T E -----------L -A -V ----M Y Q V T ---I E -K L E -R L D A K I S D C W (60)
++ +E L +
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S -L -E -E A A S I L S L I V F Q A E T -L S D -Q A N E L A N Y I
OP172782_CDS_0053 D N G D K S S A ----K -S L -E -C -G -M D Q Y L D T L Y E I E -Q I -L ----D -L R V -D --F (114)
A ++ E+ Q +
AcrIE1 R R Q G L E E A E G A C -R -N I -D -I -M R A K W V E V C G E V -N Q -H G I R V Y -G D A I D R D V D
OP172782_CDS_0053 3 AcrIF23 0.62 View Alignment OP172782_CDS_0053 V K -N K -T F T E -------L A -V ----------------------------------M Y ---(60)
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V -A K T
OP172782_CDS_0053 -Q -----V T -----------I E K L E -R L D A K I S D -C W D N G D K S S -A K S L E C G M D Q Y L D T L (120)
+ + ++ D++
AcrIF23 F G G R A L T G -T A R Q K E W A E K I R A E K V Q Q M N Q D Q -A E -M A C D P S G -L L T A A K F W I E N R N D S A
OP172782_CDS_0053 Y E I E Q I --------------L -----------------D L R V -D --F (167)
EI + F
AcrIF23 Q E I A G -F V M Q Q K A L L A Q H R S -A K A A G Q A D K V A K I A A E Y N A L T A R W G F
OP172782_CDS_0053 4 AcrIIC4 0.61 View Alignment OP172782_CDS_0053 V K N --K T F T E ------------L -A -V ----M Y Q V T I E K L E -R L D A K I S D C W -D N -G D K S (60)
K +F L + + D + K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K -N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E
OP172782_CDS_0053 S A -K -S L E C G M D Q Y L D T L Y E I E Q I L D L R V -D F (92)
A ++ L + +++ F
AcrIIC4 L A E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
OP172782_CDS_0053 5 AcrIIA28 0.55 View Alignment OP172782_CDS_0053 V K -N K ---T F T E -L A V ----M -Y Q V T I E K L E R L D -A K I S D C W D N ----G D K S S A K S L E C G (60)
K + E L ++ + K
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E -K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D
OP172782_CDS_0053 M D Q Y L -D T -L Y E I E Q I ------L D L R V -D -F (91)
+ +E+ L +
AcrIIA28 F E E V T G I -K Y D T L E S -E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;