3D Structure for OM728298_CDS_0230 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.29 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM728298_CDS_0230 1 AcrIE6 0.72 View Alignment OM728298_CDS_0230 M G R G T Y H D E M Y E R T V T A E E I Q E K L -R -Q -E -Q -E -H K -K Y Y E -S A I P E L E N L A D M A -K -Q (60)
M + + + L +L
AcrIE6 M ------------N ---N D T E V L -E -Q -Q -I -K -A -F E L -L A D E L K D R L P T L ---E I -L -
OM728298_CDS_0230 E S T K Q L M N N T L R R A K A D -Y -N -L -Y -K -K -A -V -L -D -L -T -G L L N K V Q N G -E K V -T Y G Q (120)
+ + + L +
AcrIE6 -------S P M Y T A V M V T Y -D -L -I -G -K -Q -L -A -S -R -R -A -E L I E I L E E Q Y P -G H ---
OM728298_CDS_0230 F L R A G -T V T S -K T F G E L R G -S -L (143)
+ +
AcrIE6 -----A -A D -L -S I K N ---L -C P
OM728298_CDS_0230 2 AcrIE1 0.63 View Alignment OM728298_CDS_0230 M G R G T Y H D E M Y E R T V T A E E I Q E K L R Q E Q E H -K -K -Y -Y -E -S -A I P -E -L E N L A D M A K Q E (60)
M E +++ P
AcrIE1 M ----------E -----K K L S D A Q V A ----L -V -A -A -W -R -K -Y P D -L -----------
OM728298_CDS_0230 S T K Q L M N N T L R R A K -A D Y N L Y K K A V L D L T G L L N K V Q N G E K V ----T Y G Q F -L R A -G -T -V (120)
+ + + + + ++ L+N + +
AcrIE1 --R E S L E E A A S I L -S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E E A E G A C R N -I D I -M -R -A -
OM728298_CDS_0230 -T S -----------K -T F -G E L R G S -L (147)
+
AcrIE1 K W V E V C G E V N Q H G I -R V Y G D A I D R D V D
OM728298_CDS_0230 3 AcrIIC4 0.61 View Alignment OM728298_CDS_0230 M G R G T Y H D E M Y E R T V T A E E I Q E K L R Q -E -Q E --H K K Y Y E S A I P E L E N L A D M A K Q E S T K Q L (60)
M +T + + +
AcrIIC4 M ----------K --I T S S N F A T ----I -A -T S E N F A K L S V -----------L -P K N H R E P
OM728298_CDS_0230 M N N T L R R A K -A -D Y N L Y K K A V L -D L T -G L L N K V -Q -N -G ----E -K -V -T Y G Q F L R A -G T (120)
+ +
AcrIIC4 I K G L ---F -K -S ----A V E Q F S S -A R D -F F K N -E -N -Y -S K E L A E -K -F N K E A V N E -A V E
OM728298_CDS_0230 V T S K ---T F G E -L R G S L (137)
+K +
AcrIIC4 K L Q K A I D L A E K Q G -I Q F
OM728298_CDS_0230 4 AcrIF23 0.59 View Alignment OM728298_CDS_0230 M G R G T Y -H D E M Y E -R T -V ------------------------------------------(60)
M + D +
AcrIF23 M T N F Q T W L D S -A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
OM728298_CDS_0230 ----------T A E E I Q E K L R Q E Q E H K K Y Y E -S A I P E L E N L A D M A K Q E S T K Q L M N N T L R R A (120)
+ E + + + ++ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P ---------S G L L T A A K F W I E N R
OM728298_CDS_0230 K A D Y N L Y K K A V L D L T G L L N K V Q N G E K -V T Y G Q F L R A G T V T S -K -T F G E L R G -S -L (175)
+ V LL + ++ + L
AcrIF23 N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G -Q --A D K V A K I A -A -E -Y N A L T A R W G F
OM728298_CDS_0230 5 AcrIF25 0.53 View Alignment OM728298_CDS_0230 M G R -G T Y H D E M Y E R T V --------------------------------T A E E I Q E K L ---(60)
M D V ++ E+ E +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
OM728298_CDS_0230 -R -Q E -Q E H K -K ----Y ----Y E S A I P E L E N L A D M A K Q E S T K Q L M N N T L R R A K A D Y N L -Y (120)
+ + I A + A+
AcrIF25 A -R S -L E D S -P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T ---D D A T R L D A A L W A R E ----G -
OM728298_CDS_0230 -K K A -V L D L T G L L N -K -V Q N ----G E K V T Y G Q F L R A G T ----V -T S -K ----T F G E L R -G (180)
L + VT Q +R+ G +
AcrIF25 Y Q L -L S S G L P D S Y S G -A -V P N E G R T G W V T A S Q M A R L F G G E A L -W I -E -R C Q Q E L G G A G K E
OM728298_CDS_0230 -S L (183)
AcrIF25 D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;