3D Structure for OM401714_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 88.86 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM401714_CDS_0009 1 AcrIE9 0.80 View Alignment OM401714_CDS_0009 M S Q N G N K R I K L G K K E K A V L D F L R E -H P E G V W K T D L I M H -F S W A N K Y S -S I M M R R L Y L M E K (60)
M I K + + F R + S
AcrIE9 M E M -Q ---I N S R K L G R T -I T F S R -P -G A S Y ---I F A -D L N G ----K S G -T L G ---C Q I C S
OM401714_CDS_0009 -K G L -I I I K T E ---I N P E -T ---G -R Y K K R -V Y L K Q (96)
G R + V
AcrIE9 G -G G T M G S T L S Y D G D D Q A Q F E A I C R R W Y R A H V R G -E
OM401714_CDS_0009 2 AcrIA3 0.80 View Alignment OM401714_CDS_0009 M S Q -N G -N K ---R ---I -K ---L -G K K E K A V L D F L R E H P E G V W -----K T D ---L -I M -H (60)
MS K L K ++ F E E
AcrIA3 M S F Y I M Y I K V K E -M S E Q K -Q I S L R S K Q K E L L Q R F -F E I A E V D E N G D L C I P L Y D S -S G -D -
OM401714_CDS_0009 -F S W -A -N K Y S S I M M R R L Y L M E K -K G L -I I I K T E I N P E -T -G R -Y ---------K -K R -V (120)
M + + I
AcrIA3 L T L -F K Q D S R K Y Q M Y A Y F R I L -R L I K K Q I F F I K V K K --V -K R -D -K K F L C M H S N V I D Q V K
OM401714_CDS_0009 Y L K -Q (125)
+ +
AcrIA3 S V L E S
OM401714_CDS_0009 3 AcrIIA4 0.79 View Alignment OM401714_CDS_0009 M S Q N G N K -R -I K ---L G K K E K A V L D F L R E H P E G V W K T D L I M H F -S --W A -N ---K -Y -S -(60)
M+ N + T LI + +
AcrIIA4 M N I N D --L -I R E I K N -K D Y T ---V K L -S G T D -S N S I T Q L I I R V N N D G N E Y V I S E S E -N -E
OM401714_CDS_0009 S I M M -R R L Y -L M E K K G L I I I K T E I N P -E T -G R -Y -K K R V Y L --K Q (105)
+ + K G E E +
AcrIIA4 -S I V E K F -I S A -F K N G W N Q -E Y E D -E E E -F Y N D -M Q T I T L K S E L N
OM401714_CDS_0009 4 AcrIIA12 0.79 View Alignment OM401714_CDS_0009 M S Q N G N K R I K L -G K K E K A V L D F L R E H P E G V W K T D L I M -H F S -W A N K Y S S I M M R R L Y L M E K (60)
MS + ++ ++ E + T + R
AcrIIA12 M S K T M ----Y -K N D -V I E L I K N A K T N N E E L L F T ----S -V E R N T R E A A T Q Y F R C P E K H V S
OM401714_CDS_0009 ----K ----G L I I I K T E I N P E T G R Y -K K R -V Y ---L -K Q (99)
R +
AcrIIA12 D A G V Y Y G E D F E F D G F E I F -E --D D L I Y T R S Y D K E E -L -N
OM401714_CDS_0009 5 AcrVIA6 0.77 View Alignment OM401714_CDS_0009 M S Q N G N K R I K -L G K K E K A V L D F L R E H P E G V W K T D L I M H F S W ----A ---N ---K -Y S S -I (60)
M + L L G D A
AcrVIA6 M A D K V K S I Q -P G P I F Y D V F L V Y L -R V I -G T N L K D W C A P H G V T A T N A K S A A T G G -W N G -T K
OM401714_CDS_0009 M M -R R L Y L M E K K G L I I I K T E I N P E -T -G R Y -K K R V Y --L -K Q (102)
M E R R+
AcrVIA6 A -R A L R Q K M I D E -------V -G E E T -F L R L Y T E R L R R E -A -A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;