3D Structure for OM373561_CDS_0060 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 93.46 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM373561_CDS_0060 1 AcrIE1 0.85 View Alignment OM373561_CDS_0060 M --T ----N -E -E -L F ----E ----V -------F ----Q E -----------A M R E L E H S I (60)
M + EL I
AcrIE1 M E K K L S D A -Q -V -A -L V A A W -R K Y P D L R E S L E E A A S I L S -L I V F Q A E T L S D Q A N E L A N Y I
OM373561_CDS_0060 R Q I -N N E A D ----R Y I I ---N -K -A -I -E L I D S ---V A W K Y E ----E -D --E (112)
R E + I E+ + +
AcrIE1 R R -Q G L E -E A E G A C R N I D I M R A -K -W -V E V C G E V N Q H G I R V Y G D A I -D R D V D
OM373561_CDS_0060 2 AcrIIA34 0.83 View Alignment OM373561_CDS_0060 M -T -N E ---E L F -----E ---V F --------------------Q E -----------A ---(60)
M + + + +
AcrIIA34 M K N I A N E I K T I -R Y A F E D G R S T Q K S I M R K I K A L T D Q F E T M D D L I D S L N S Y A D T H Y T -W A I
OM373561_CDS_0060 -----M R E -L E H S I R -Q -I N N E A D R Y ---I I --------N ------K A I ----E -L I D S - (120)
R + NN + + +
AcrIIA34 T Y F Q L A R -I I I S F Q -A -S -N N T T S E K K I D L -Q S G P I E V N -G K L K I R V T V D E F M -A D L A -N
OM373561_CDS_0060 V -----A W K Y E E -D E (135)
+ K
AcrIIA34 W E H L E D I K K L A K E L A
OM373561_CDS_0060 3 AcrIF2 0.82 View Alignment OM373561_CDS_0060 M --T -N E E ---L F E V -F ------Q E A M R -E L E H S I R ---Q -I --N ------------N E A (60)
M + + + E + +
AcrIF2 M I A Q Q H K D T V A A C E -A A E A I A I A K D Q V W D G E G -Y -T K Y T -F D D N S V L I Q S G T T Q Y A M D A D
OM373561_CDS_0060 D R Y I I N K A ----I E L I -D -S V A ----W K Y -E ---E -D E (98)
D I + S+ + E E
AcrIF2 D A D S I K G Y A D W L D D E -A -R S A E A S E I E R L L E S V E -E -E
OM373561_CDS_0060 4 AcrIF15 0.82 View Alignment OM373561_CDS_0060 M T -N E E L F E ----V -F -Q E A M R E L E H S I -R Q ---I -N --N E A D --------R Y I I -N -K -(60)
MT + E + +E + ++ +
AcrIF15 M T T I T I A Y E V S N D -K -V E T I K T M V E S Q Q I H N V N F N G E E F T I --E R G D F T S I D K D -E -A -E
OM373561_CDS_0060 A -I -E -L I D S V A W K Y -E E D E (80)
L+ +
AcrIF15 -H -V -K L L N K I Q D I -I H G Y S
OM373561_CDS_0060 5 AcrIIA19 0.82 View Alignment OM373561_CDS_0060 M T -N E E -L F ----E ----V F ----------------------------------------(60)
M E
AcrIIA19 M K L I V E V -E E T N Y K N L V N Y -T K L T N E S H N I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N R D L I
OM373561_CDS_0060 --Q E ----A M R E L E H S I R Q I -N -----------N E A D -R Y I I ----N -K -A I E -L -I D S - (120)
+E+ I+ + N + R + +
AcrIIA19 E F K F M L I E Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V -F R Q L F E E V I -S -N -P D T -V -L K A
OM373561_CDS_0060 ---V -A -W -K Y -E -E D E (137)
E
AcrIIA19 F H S -Y -T -S F -L -E E N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;