3D Structure for OM373558_CDS_0057 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.74 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM373558_CDS_0057 1 AcrIE1 0.70 View Alignment OM373558_CDS_0057 M E --H G ----S K E ----Y -Y E ----N Q S E Y W F N E A S K F V K Q R D I L I D D N A N L R N Q R -D K L (60)
ME Y + E + +S V Q + L D L N
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y -P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G
OM373558_CDS_0057 Q R K L D E V V S M V N A Y I T A E R A Y S G E S A Y N L L E N E L N R I L E D --E (103)
++ + + + + + +++ +
AcrIE1 L E E A E G A C R N I D I M R A K W V E V C -G E V N Q H G I R V Y G D A I D R D V D
OM373558_CDS_0057 2 AcrIE6 0.58 View Alignment OM373558_CDS_0057 M E H G S K E Y Y E N Q S E Y W F N E A S K F V K Q R D I L I D D N A N L R N -Q R D K L -Q -R -K L D E V -V S M V (60)
M E E+Q + A L + + +S
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P -M Y T A V M V T -Y -D -L I G K Q -L A S R R
OM373558_CDS_0057 N A Y I T A E R A Y S G E -S A Y N L L E N E L N R I L E D E (91)
I + A L + L
AcrIE6 A E L I E I L E E Q Y P G H -A A D L ---S I K N -L C -P
OM373558_CDS_0057 3 AcrIC3 0.56 View Alignment OM373558_CDS_0057 M E H G S K -E Y Y E ------N -----Q S -E -Y W F -N ------E A S K F V K Q R D I L -I D D N A N L -(60)
M + + + +R ++
AcrIC3 M S I Q V T S T N -G R T V N L E -I E L G S V -V -A S S -G Q V K F M A D K T D R G L E S R F L V P E A -----G
OM373558_CDS_0057 R ------N -Q R -D K L Q -R K L D E V V -S -M V -N -A Y -I T A E R A Y S G E S A Y -N -L -L -E N E L N (120)
+ + + + A + +N
AcrIC3 N R R I E V A -L T -G R D -L E -A A N A L F S -E -L A -A -S V -E A T N E M Y -R E L -D -A -E -R -A Q I N
OM373558_CDS_0057 R I L E D E (126)
++LE
AcrIC3 K A L E -G
OM373558_CDS_0057 4 AcrIIA19 0.56 View Alignment OM373558_CDS_0057 M E H G ---S K E Y Y E N --------Q S -E -Y W F -N -----E A S K F V K Q R D I L I D D N -----A N (60)
M + E + +S + L D
AcrIIA19 M -K L I V E V E E T N Y K N L V N Y T K L T -N -E S H -N -I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N R
OM373558_CDS_0057 L R -N -Q R D K L Q R K L D E V V S M V N A Y I T A E -R -A Y --------S -G E S A ----Y -N -L -L -E (120)
+ L E+++ + ++ AY ++
AcrIIA19 D L I -E F K F M L I E Y C K E A L Q D I K E L A N S -D -E A Y E T D E A F E A V F -R Q L F E E V -I -S -N -P -
OM373558_CDS_0057 N -------E L N R I L E -D E (138)
+ LE
AcrIIA19 D T V L K A F H S Y T S F L E E N K
OM373558_CDS_0057 5 AcrIF23 0.54 View Alignment OM373558_CDS_0057 M E -H -G S K ---E Y Y E ----N ----------------------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G -Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
OM373558_CDS_0057 ----------------Q ----S -E ----Y W F N E A S K F V K Q R D I L I D -D N -A N L R -N Q R D K (120)
E ++ N +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F -W I E N R -N D S A Q E
OM373558_CDS_0057 L -Q -R K -L -D -E V V S -M V N A Y I T A E R -A Y S G E S A Y N L L E N E L N R I L E D --E (171)
+ + + E N +
AcrIF23 -I -A G -F -V -M Q -Q K A L L A -Q H R S A K A -A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;