3D Structure for OM373558_CDS_0054 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.73 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM373558_CDS_0054 1 AcrIE6 0.71 View Alignment OM373558_CDS_0054 M S N E Y ---R D A Q I -V -K -H -A -L -Q Y -Y I N R P N ---A -------S E L D L K R E Q K V L D K V T (60)
M+N+ R + + K L
AcrIE6 M N N D T E V L E Q Q I K A -F -E -L -L -A D -E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R
OM373558_CDS_0054 N Q V K D M Q E -N -W D I ---K N K --E -E -R K (88)
+ + E
AcrIE6 A E L I E I L E E -Q Y P G H A A -D L S I -K N L C P
OM373558_CDS_0054 2 AcrIE1 0.57 View Alignment OM373558_CDS_0054 M S ----N E ---Y R D -------A Q I -------V K H A L Q Y Y I N R -P N ------------A --(60)
M + + ++ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S -D Q A N E L A N Y I R R -Q G
OM373558_CDS_0054 --S E -L -D L K -R E Q K V L D -K V -T N -Q -V K D -M Q E -N -W D I K N K -E ---E -R K (112)
K
AcrIE1 L E E A E -G A C -R N I D I M R -A K -W V -E -V C G -E V -N Q -H G I R V Y G D A I D R -D V D
OM373558_CDS_0054 3 AcrIF23 0.57 View Alignment OM373558_CDS_0054 M S N --E -Y R D A Q I -V K H A L Q -Y --------Y I N R P N ------------------------(60)
M+N A I V
AcrIF23 M T N F Q T W L D S A D I P V Q Q -N G Q W I D L E T G I A -Y ----D P S Y N Y A A N T R R A S L S P R G I D A R A
OM373558_CDS_0054 ---A -------------------S E L -D L K -R E ---Q -K V -L -D -K V T N Q V K D M Q E ---- (120)
+ Q + +
AcrIF23 V A K T F G G R A L T G T A R Q K E W A E K I R A -E K V -Q Q M N Q D Q A E -M -A -C D -P S G L L T A A K F W I E
OM373558_CDS_0054 N W D I ------------------------------------K N K E E ----R K (171)
N
AcrIF23 N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
OM373558_CDS_0054 4 AcrIIC4 0.55 View Alignment OM373558_CDS_0054 M S --N -E Y R D A Q I V K H A L Q Y Y I N R P N A S E L D L K -R E Q K V L D -K V T N Q V K -D -M Q -E ----(60)
M + + P +K K + ++++
AcrIIC4 M K I T S S N F A T I A -T S E N F A K L S V L P K N H R E P I K G -L F K S A V E -Q F S S A R D -F F -K N E N Y S
OM373558_CDS_0054 --N ------------------W D I -K N K E E --R K (94)
AcrIIC4 K E L A E K F N K E A V N E A V E K L Q K A I -D L A E K Q G I Q F
OM373558_CDS_0054 5 AcrIC3 0.55 View Alignment OM373558_CDS_0054 M -S -----------------N E -Y -R D -A -Q -I V K H A L Q -Y ----Y I N R ----P N -----(60)
M + V + + P
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S -V -V A -S -S -G Q V -K F M A D -K T D R G L E S R F L V P -E A G N R
OM373558_CDS_0054 --A ------S -E -L -D L -K -R E Q -K V L D K V T N Q V K D M Q E N ----W D I -K N K E -E R K (116)
++ +M N
AcrIC3 R I E V A L T G R D L -E -A A -N -A L F -S E L A -A S V E A T N E M Y R E L D A E R A -Q I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;