3D Structure for OM236515_CDS_0162 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM236515_CDS_0162 1 AcrIE6 0.68 View Alignment OM236515_CDS_0162 M V K R A M L ---L D E K L D K L M K T I L R L -K A Y -K E E -E -N L R R V I G E F H S I I D Y A Y E G M Y I A E (60)
M + + L + V I + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T -L E I L S -P M Y T A V M V T Y D L I G K Q L A S R R A E L I
OM236515_CDS_0162 D M L R E E E ----S K -G --K -E V S T Y (84)
+ L E +
AcrIE6 E I L E E Q Y P G H A A -D -L S I K N L C -P
OM236515_CDS_0162 2 AcrIE1 0.66 View Alignment OM236515_CDS_0162 M V ---K R -A M L -L --------------------D E -K -L -D ----K -L M K T -I L R L K A Y K (60)
M L L + L Y
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V -F Q A E -T L S D -Q A N E L A N Y I
OM236515_CDS_0162 E E E N L R R V I G E F H S I I D Y A -Y E G M Y I A E D -M L R E E E S K G ----K E V S T Y (109)
+ ID +
AcrIE1 R R Q -G L E E A E G A C R N I D I M R A -K W V E V C G E V N Q H G I R V Y G D A I D R -D V D
OM236515_CDS_0162 3 AcrIIC4 0.62 View Alignment OM236515_CDS_0162 M V -K --R A M -L -L ------------D E ----K ----L -D -K -L M K -T I L R L K A Y K -E -E E (60)
M + + + ++
AcrIIC4 M K I T S S N F -A -T I A T S E N F A K L S V L P K N H R E P I K G L -F -K -S A V -E Q F S S A R D F F K N E N Y
OM236515_CDS_0162 N L -R R V I G E F H -S I I D Y A Y E G M Y I A E D M L R E E E S K G K E V S T Y (102)
+ + + E + + E
AcrIIC4 -S K E L A E K F N K E ----A V N E A V E K L Q K A I D L A E K Q -G I Q --F
OM236515_CDS_0162 4 AcrIF25 0.55 View Alignment OM236515_CDS_0162 M V K ----R A M L --------L D E ----K -------L D ----K L ----M K T -------I L R L (60)
M L + L + ++
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A -
OM236515_CDS_0162 -----K ----A ----Y ----K ----E ---------------E E N L R R V I G -E -F -H S I -I (120)
+ + +
AcrIF25 M A R S L -E D S P I F Y R N -K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E -G -Y Q L -L S
OM236515_CDS_0162 D Y --------------------------A -Y E G M Y I A E D M L -R -E -E E S -K -G -K E V S T Y (180)
+E
AcrIF25 S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L -F G G E A L W I E R C -Q -Q -E L G -G -A -G -K E D G R
OM236515_CDS_0162 5 AcrIC3 0.54 View Alignment OM236515_CDS_0162 M V -K R A M L ---L -------D -E K L ---D --------K ----L M K T I L -R L --K A -Y K ---(60)
M + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V V A S S -G Q V K F M A D -K T D R G L E S R F L V P E A G N R R I E V A
OM236515_CDS_0162 E -E E N L R R V I G E F H S I I D Y A Y E G M Y I A E D -M L -R E E E S -K G -K E V S T Y (108)
L + F ++ E L E K +
AcrIC3 L T G R D L E A A N A L F S E L A A -S V E A T N E M Y R E -L D -A E R A Q -I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;