3D Structure for OM033135_CDS_0034 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.92 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OM033135_CDS_0034 1 AcrIIA27 0.75 View Alignment OM033135_CDS_0034 M K T F L F V I D -F I D -D -L T G Q F -R T M T K E Y R A K D Y Q S A K K G I N Q Y L E T N K T -I ------H -(60)
MKTF ++ + + + AK A K + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L -T
OM033135_CDS_0034 S -V L -S --------C -I F -I --K E I (85)
+ + E+
AcrIIA27 -A -I D -N T H R R A W G -R R -Y L R V E E A
OM033135_CDS_0034 2 AcrIE2 0.64 View Alignment OM033135_CDS_0034 M K T F L F V -I D F I D D -L T G Q F R T M T K E -Y R -A K -D Y Q S A K K G I N Q Y L E T N K T I H -S -V L S C (60)
M T L + +G + AK ++Q L
AcrIE2 M N T Y L -I D P R K N -N D N S G E R F ---T -V -D A V -D I T A A A K S A A Q Q I L ---G ---E -E -F E G
OM033135_CDS_0034 I F I K -E ---------------------------------I (100)
+ + +
AcrIE2 L V Y R E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
OM033135_CDS_0034 3 AcrIC9 0.63 View Alignment OM033135_CDS_0034 M -K ---T F L F V I D F I D D L T G Q F R -T M T K E Y R A K D Y Q S A K K G I N Q Y L E T N K T I H S V L S C I F (60)
M +F + + + + + +V
AcrIC9 M E T K M T S F Y K I T A -Y ------N -S -Q A L Y -F W G T D A D V D R Y V D W L -N R D R E -I N V ---Y A
OM033135_CDS_0034 I K E ------------------------------I (94)
+ +
AcrIC9 A E A I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
OM033135_CDS_0034 4 AcrIF19 0.57 View Alignment OM033135_CDS_0034 M K ----------T F L F V -I D F I D D L T G Q F R T M T K E Y R ---A --K ----------------(60)
MK + + D+ G +
AcrIF19 M K P L H T M N Y D N N Q M S L -V Y E S Y D E -Y G F E Y S V K L K I S V R D Y R G I D V S A F N A F P E W E D T L R
OM033135_CDS_0034 ------D Y -Q S A K K G I N -Q -Y L E T -N K T I H S -V L S C I F I K -E I (103)
+ Y +I
AcrIF19 M R D R V M S -V E E I E N A M I S -R Y K S -L F I ---A P P D C T --Y E F D I
OM033135_CDS_0034 5 AcrIC8 0.55 View Alignment OM033135_CDS_0034 M K T F L F V -I -D F I D D L T G Q --F ----R -T M T K E Y R A K D Y Q S A K K G I N Q Y L E T -----N K T (60)
M + F T K A I E
AcrIC8 M Y A -I R -K -I Q F F Y G P T D K K S Y V G E E -A G G R -R E L F K T R A E A Q A R I E D L E E G V Y Y L A H N E
OM033135_CDS_0034 I -H -S V L S C I F I K -E ----------I (86)
++++ E
AcrIC8 S G -R P D Y K I V W V R G E A Q F E H A R W M R G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;