3D Structure for OL955261_CDS_0233 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.58 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OL955261_CDS_0233 1 AcrIIA27 0.76 View Alignment OL955261_CDS_0233 M M P R Y S V I V T R --D -------T T E S A V V E I E A S N G T E A E H K A A A F A S D N P H L D W K R D Y T -(60)
M ++IV+ ++++ +EA N EA +KA S
AcrIIA27 M -K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S ---F S S K W ---K F
OL955261_CDS_0233 -----P -N A D E M V Y ---T N G -A D L -I -E (88)
+D +
AcrIIA27 N M R D L -T A I D N T H R R A W G R R Y L -R V E E A
OL955261_CDS_0233 2 AcrIE2 0.68 View Alignment OL955261_CDS_0233 M M P R Y S V I V T R D -T T E -S A V -V E I E -A -S N G T E A E H K A A A F A -S D N P H L D W K R D Y T P N A -(60)
M Y + R + ++ A A + + L + N
AcrIE2 M -N T Y L I D P -R K N N D N S G E R F -T V D A -V D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S
OL955261_CDS_0233 D E M ---V Y ---------T --N -G A D L I -E (89)
T +
AcrIE2 G M F Q A Y H H L H G T N R T E T T V G -Y P F H V M E L
OL955261_CDS_0233 3 AcrIC9 0.62 View Alignment OL955261_CDS_0233 M M ---P R Y S V I V T R D T T E S A V V E I E A S N G T E A E H K A A A F A S D N P H L D W --K R D -Y T ---P (60)
M I + +A+ + ++++ + D +
AcrIC9 M E T K M T S F Y K I T A Y -N -S Q A L Y -F W -G T D A D V D R Y V D W L N R D R -E I N V Y A A E A I P E A E W -
OL955261_CDS_0233 --N --A -D E M V Y -----T --N G A D L --I -E (90)
D V
AcrIC9 A Q Y E G -R D -D V -L S G E E C G W D D F M -S A -E A
OL955261_CDS_0233 4 AcrIE8 0.59 View Alignment OL955261_CDS_0233 M M P R Y S V I V T R D T T E S A -V V E I E A S N G T E A E H K A A A F A S D N P H L D W -K R D -Y T P N A D E M V (60)
M ++ T E + A + Y E
AcrIE8 M -T T I T I N -T -Y -D -P E A R F N M S G E E A K E F F A F V E E Q A K V S G F D V Y Y D S C T Y V D E E S E R F
OL955261_CDS_0233 Y T N G A D L I E (69)
AcrIE8 V E K C F Q -N Y
OL955261_CDS_0233 5 AcrIA 0.56 View Alignment OL955261_CDS_0233 M M ----------------------P -R -Y --S -V -I ------V -T R -D -T T E -S A V V E I E (60)
M + I
AcrIA M V E V K Q K T L S Y K L K I N T R D Y S I T L E A E L K A V I N -V K G N D L V Y E D K -Q -Q K F -V G Y I E T I S
OL955261_CDS_0233 A ---S -N G -T E A E H K A A A F A S D N P H -L D W K R D Y T P N A D E M V Y T N G A D L I E (110)
A+ + + + E N IE
AcrIA S Y E T K N A -K E N A D E I L N E R F E K Y A N G ---L K V L E Q T -A E A --I N A E I E I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;