3D Structure for OL702939_CDS_0048 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.92 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OL702939_CDS_0048 1 AcrIIA27 0.75 View Alignment OL702939_CDS_0048 M N V Y K A D Y -W -K D -W G --W -G -A Y D E E S A I I I A N T A S E A L G F A L Q E F P D S I -----A -E -(60)
M + + D + A + EA A E S
AcrIIA27 M K T F N I I V S E S A N L K E H S -S -E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R -D
OL702939_CDS_0048 Y -W E I E ---------Q -I D T -S K -P G I A (88)
I+ A
AcrIIA27 -L T A I D N T H R R A W G R -R Y L -R V -E -E -A
OL702939_CDS_0048 2 AcrIE2 0.70 View Alignment OL702939_CDS_0048 M N V Y K A D Y W K D W G -W -G A Y D E E S A I I I A N T A -S E A L -G -F A L Q E -F -P D S -I ---A ---E (60)
MN Y +D K G A+ I A A+ +
AcrIE2 M N T Y L I D P R K N N D N -S G E R F T V D A V D I T A A A K -S A A Q -Q I L G E -E -F E G L V Y R E T -G E S N
OL702939_CDS_0048 -Y ---W E -I ----E -Q -I ---D ---T -S -K --P G -I A (97)
+ + +
AcrIE2 G -S G M F Q A -Y H H L -H -G T N R T E T T V -G Y P -F H V M E -L
OL702939_CDS_0048 3 AcrIC9 0.64 View Alignment OL702939_CDS_0048 M -N ----V Y K A D Y W K D W G W G A Y D E E S A I I I A N T A S E A L G F A L Q E F P D S -I A E Y W E ---I -(60)
M + YK+ + T ++ + +
AcrIC9 M E T K M T S F Y K I T A -Y ------N -S Q A L Y -F W G T D A D V D R Y -V D W L N R D R E I N V Y A A E A -I
OL702939_CDS_0048 E -----Q ----I ----D T S ----K ----P -G I A (93)
+ A
AcrIC9 P E A E W A -Q Y E G -R D D V L S G E E C G W D D F M -S A E A
OL702939_CDS_0048 4 AcrIIC1 0.59 View Alignment OL702939_CDS_0048 M N -V -Y K A D Y W K D W G W G A Y D E -E -S A I I I A N T A S E A L G F A L Q E F ---P -D S I ----A E Y -(60)
M YK+ G +++I + + + D +
AcrIIC1 M A N K T Y K I G K N --A G Y -D G -C G L C -L A A I S E N E A I K V K Y L R D I C P D Y D G D D K A E D W L R -W
OL702939_CDS_0048 ---W E I -E ------Q I D -T -----S --K -P -G --I A (96)
+ Q +
AcrIIC1 G T D S R V K A A A L E M E Q Y -A Y T S V G M A S C -W -E -F V E L
OL702939_CDS_0048 5 AcrIF9 0.58 View Alignment OL702939_CDS_0048 M -N V Y K A D Y W K D W G W G A Y D E E S A I I I A N T A S E A L G F A L Q E F P D S I A E Y W E I E Q I ----D T (60)
M +Y + + E I A+++S A A E IE++
AcrIF9 M K A A Y I I K E V Q -N I -N S -E R E G T Q I E A T S L S Q A K R I A S K E Q -C F H G T V M R I E T V N G L W L -
OL702939_CDS_0048 ----S -K -P --G -I A (75)
AcrIF9 A Y K E -D G K R W V -D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;