3D Structure for OK499995_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment OK499995_CDS_0053 1 AcrIIA7 0.70 View Alignment OK499995_CDS_0053 M K N T S T G N S D Q I M Y L D F G -S A L R K L K A G Y C V S R A G W N G K G M H L Y L E N H L G L V V Q A G I ---(60)
M AL LK G V R GWNGKGM + + I
AcrIIA7 M T F G --------------Q -A L E S L K R G H L V A R K G W N G K G M -F I F M R P E D S L P T N M I V N Q
OK499995_CDS_0053 ---Y K G -----------H ----K -R -E Y -A P V I C M F T A Q G I H Q P G W L A S Q A D M L A E D W C V (120)
+CM A G GWLASQ DMLA DW +
AcrIIA7 V K S L P E S F K R W V A N N H G -D S E T D R -I K -F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I
OK499995_CDS_0053 V F P E (124)
V E
AcrIIA7 V --E
OK499995_CDS_0053 2 AcrIIA4 0.52 View Alignment OK499995_CDS_0053 M K N T S T G N S D Q I M Y L D F -G S A L -R K L K -A -G Y C V S R A G W N -G K G -M H L Y L -E N H L G L V -V (60)
M + +K Y V G + N G V
AcrIIA4 M N I N -D ---------L -I ----R -E I K N -K D Y T V K L S G T D S N S I T Q L I I -R V N N D G N E Y V
OK499995_CDS_0053 Q A -G I Y K G H K R -E Y A P V I C M F T A Q G I H Q P G W L A S Q A D M L A E D W C V --V F P -E (112)
I F + + + +
AcrIIA4 I S E -S E --N -E S I V E K F I S A F --K N G W N Q E -Y E D E E E F Y N D M Q T I T L K S E L N
OK499995_CDS_0053 3 AcrIF18 0.50 View Alignment OK499995_CDS_0053 M K N T S T G N S D Q I M Y L D F G S A L R K L K A G Y C V S R A G -W N G K G M H L Y L -E N H L -G L V -V Q A G I (60)
M + WN + +
AcrIF18 M T T I K A A Y --------------------I S K D Q -N W N D G T T T Y W -F D V -N G E -T F G V V H G
OK499995_CDS_0053 Y K G H K R E Y A P -V I C M F T A Q G I H Q P G W L A S Q A D M L A E D W C V V F P E (104)
+ G+ + + Q E
AcrIF18 ---G E S ---W N -A K V V D C D G A P S D Q Y T V D Q F N I --T -E D M -I A E
OK499995_CDS_0053 4 AcrIIA24 0.50 View Alignment OK499995_CDS_0053 M K N T S T G N S D Q I M Y L D F G S A L -R -K L K A -G Y C V -S R A G W N G K G M H L Y L E N H L G L V V -Q A -(60)
MK ++ +K +Y + +
AcrIIA24 M K K A Q Q L -L ------------K -E -I K T N N V -S Y A I --M D E -D N E I Y C N K E T N N I M D -I Y
OK499995_CDS_0053 G I Y K G H K R E Y A P V I C M F T A Q G I H Q P G W L A S Q ---A D M L A ----E -D -------W C V ----(120)
Y V G S + +
AcrIIA24 -G Y D N E N G H F Y G V Y G D V V -D G Q I D S R Y -F S D D A I L N A I D K L L F -L G D P I K R T D L P -S D A D
OK499995_CDS_0053 V ----F -P E (129)
F E
AcrIIA24 F K R T F F F E E
OK499995_CDS_0053 5 AcrIF9 0.49 View Alignment OK499995_CDS_0053 M K N T S -T G N -S ---D --Q --I -M -Y -L D F G S A L R K L K A G Y C V S R A G -W -N G K G M H L Y L E N (60)
MK + +A R + +E+
AcrIF9 M K A A Y I I K E V Q N I N S E R E G T Q I -E -A T S L S Q A K R I A S K E Q ------C -F -H G T V M -R I E T
OK499995_CDS_0053 H L G L V V Q A G I Y K G H K R E Y A P V I C M F T A Q G I H Q P G W L A S Q A D M L A E D W C V V F P E (113)
+ +G+ D V
AcrIF9 ---------V -----------------N G L W L -A Y K E ---D --G --K R W V D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;