3D Structure for NC_019448_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 90.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment NC_019448_CDS_0024 1 AcrIE1 0.90 View Alignment NC_019448_CDS_0024 M -T ----N L L E Q ----E -Q --------------L -E -K -D --------V -K -D -I -I -W V (60)
M + + +
AcrIE1 M E K K L S D A Q V A L V A A W -R -K Y P D L R E S L E E A A S I L -S -L -I V F Q A E T L -S -D -Q -A -N E L
NC_019448_CDS_0024 L D R M I A R G E Q -Y ---T E A Y D I L V N K L E R Q E K R I V E I -----K K Q N --G I -F (111)
+ G DI K +
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
NC_019448_CDS_0024 2 AcrIE6 0.86 View Alignment NC_019448_CDS_0024 M T -N L L E Q E Q L E K D ----V K D I I W V L D R M I A -R -G -E ----Q Y T E A Y D I L V N K L E R Q E K R (60)
M+ EQ K + ++ L YD++ L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E -I -L -S -P M Y T A V M V T Y D L I G K Q L A S R R A E
NC_019448_CDS_0024 I V E -I ----K ---K Q --N -G -I F (83)
++E +
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
NC_019448_CDS_0024 3 AcrIF15 0.82 View Alignment NC_019448_CDS_0024 M T N L -L E Q E Q L E K D V K D I I W V L D R M I A R G E -Q ---Y -T -E A Y -D I L ----V -N -K L E R -Q (60)
MT++ + E V I ++ ++
AcrIF15 M T T I T I A Y E V S N D K V E T I K T M V E S Q Q I H N V N F N G E E F -T I E -R G D -F T S I -D -K D E A -E -
NC_019448_CDS_0024 -E -K R I V E I K K Q N G -I F (77)
K + I
AcrIF15 H -V K L L N K I Q D I I H G Y S
NC_019448_CDS_0024 4 AcrIF2 0.82 View Alignment NC_019448_CDS_0024 M --T -N L ---L -E -Q -E Q -L ------E -K D V K -D I -I ---------W V L D -R -M I A R -G E (60)
M + + V VL
AcrIF2 M I A Q Q H K D T V -A -A -C -E A A E A I A I A -K D Q V W D G E G -Y T K Y T F D D N S V L I Q -S G -T T Q Y -
NC_019448_CDS_0024 -Q Y -T E A Y D I L V N K L E R Q E K R I V ----E I ----K K Q N G I F (100)
+ D + ++ + + +
AcrIF2 A M -D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S V E E E
NC_019448_CDS_0024 5 AcrIIA34 0.82 View Alignment NC_019448_CDS_0024 M -T N L ---L -E Q ----E Q ---L -E -K ----D -----------V K D I I W V L D R M I A R G E Q Y (60)
M + + E D+I L + +
AcrIIA34 M K N I A N E I K T -I R Y A F E D G R S T Q -K -S I M R -K I K A L T D Q F E T M D D L I D S L N S Y A D T H Y T W
NC_019448_CDS_0024 T E A Y D I L V N K L E R Q E K R I V ----E I --------------------------------K --(120)
Y L+ +
AcrIIA34 A I T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A D L A N W E H L E D
NC_019448_CDS_0024 --K -Q N G -I F (130)
+
AcrIIA34 I K -K L A K E L A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;