3D Structure for NC_019448_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment NC_019448_CDS_0024 1 AcrIE6 0.77 View Alignment NC_019448_CDS_0024 M T -N L L E Q E Q L E K D ----V K D I I W V L D R M I A -R -G -E ----Q Y T E A Y D I L V N K L E R Q E K R (60)
M+ EQ K + ++ L YD++ L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E -I -L -S -P M Y T A V M V T Y D L I G K Q L A S R R A E
NC_019448_CDS_0024 I V E -I ----K ---K Q --N -G -I F (83)
++E +
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
NC_019448_CDS_0024 2 AcrIE1 0.59 View Alignment NC_019448_CDS_0024 M -T ----N L L E Q ----E -Q --------------L -E -K -D --------V -K -D -I -I -W V (60)
M + + +
AcrIE1 M E K K L S D A Q V A L V A A W -R -K Y P D L R E S L E E A A S I L -S -L -I V F Q A E T L -S -D -Q -A -N E L
NC_019448_CDS_0024 L D R M I A R G E Q -Y ---T E A Y D I L V N K L E R Q E K R I V E I -----K K Q N --G I -F (111)
+ G DI K +
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
NC_019448_CDS_0024 3 AcrIF23 0.59 View Alignment NC_019448_CDS_0024 M -T N L L E Q E Q -------------L E K ----------------------------------(60)
M + ++ LE
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E -T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
NC_019448_CDS_0024 -------------D ------------------V ----K D I I W V L D R M I A R G E Q Y ---T -E (120)
++ ++ I
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
NC_019448_CDS_0024 A Y D -I -L -V N -K -L E R Q E K R I ---------V -E I ----K K Q N -G ---I F (169)
L Q + + F
AcrIF23 F V -M -Q -Q K -A -L L A -Q H R S A K A A G Q A D K V -A K -I A A E Y N A L T A R W G -F
NC_019448_CDS_0024 4 AcrIIC4 0.57 View Alignment NC_019448_CDS_0024 M -T N L ---L E Q ---E ---Q --------------L E K -D V K -D I I -W V L D -R M I A R G E ---(60)
M + + E L K + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S -A V E Q -F S S -A R D -F F K N E N Y S K
NC_019448_CDS_0024 -Q Y T E A Y D -I L -V N K L -E R Q E K R I V E I K K Q N G -I F (95)
+ + E +++++ +G F
AcrIIC4 E L A E K F N K E -A V N -E A V E -K L Q K A I D L A E K Q G I Q F
NC_019448_CDS_0024 5 AcrIC3 0.55 View Alignment NC_019448_CDS_0024 M -T N L -L E Q E -Q ---------L E ---K --------D ---V -------K -D I I W V L D R -M -(60)
M ++ + + + + ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P -E A G N R R I E V A L T
NC_019448_CDS_0024 I A R ----G E ----Q Y T E A Y D I L V N K L E R -Q E K R I -V E I -K K Q N G I F (106)
++ + + K
AcrIC3 G R -D L E A A N A L F S E L A A S V E A T N E M Y R -E L D A E -R A Q -I N K A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;