3D Structure for NC_009815_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.63 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment NC_009815_CDS_0024 1 AcrIIA1 1.00 View Alignment NC_009815_CDS_0024 M T I K L L D E F L K K H D L T R Y Q L S K L T G I S Q N T L K D Q N E K P L N K Y T V S I L R S L S L I S G L S V S D (60)
MTIKLLDEFLKKHDLTRYQLSKLTGISQNTLKDQNEKPLNKYTVSILRSLSLISGLSVSD
AcrIIA1 M T I K L L D E F L K K H D L T R Y Q L S K L T G I S Q N T L K D Q N E K P L N K Y T V S I L R S L S L I S G L S V S D
NC_009815_CDS_0024 V L F E L E D I E K N S D D L A G F K H L L D K Y K L S F P A Q E F E L Y C L I K E F E S A N I E V L P F T F N R F E N (120)
VLFELEDIEKNSDDLAGFKHLLDKYKLSFPAQEFELYCLIKEFESANIEVLPFTFNRFEN
AcrIIA1 V L F E L E D I E K N S D D L A G F K H L L D K Y K L S F P A Q E F E L Y C L I K E F E S A N I E V L P F T F N R F E N
NC_009815_CDS_0024 E E H V N I K K D V C K A L E N A I T V L K E K K N E L L (149)
EEHVNIKKDVCKALENAITVLKEKKNELL
AcrIIA1 E E H V N I K K D V C K A L E N A I T V L K E K K N E L L
NC_009815_CDS_0024 2 AcrIB5 0.70 View Alignment NC_009815_CDS_0024 M T I K L L D E F L K K H D L T R Y Q L S K L T G I S Q N T L K D Q N E K P L N K Y T V S I L R S L S L I S G L S V S D (60)
M + L + T YQL +TG+ +T++ K + ++ +R + + ++ +
AcrIB5 M A -G F I K K Y L D S R G W T I Y Q L G N A T G L A H Q T I R S A D S K T V D Q L S A K N V R L I A E V F H F T A G E
NC_009815_CDS_0024 V L F E L E D I E K N ---S D D L A G F K H L L D K Y K L S F P A Q E F E L -Y C L -I K E F E S A N I E V L P F T F (120)
+L E +IE + L + +K + +
AcrIB5 I L D E F Y E I E E E I T N D E I L K E L T T V F E K H G H N T -D E --I -S S E -L -L D ---G E T ----I --
NC_009815_CDS_0024 N R --F -E N E E H V N I K K D V C K A L E N A I T ---V -L K E -K K N E L -L (163)
++ ++ D+ A E + E+
AcrIB5 K L D M -T --D D N I T K L A D A V N A T E H F T A Y L D S S -T D Y M I V E A T Q
NC_009815_CDS_0024 3 AcrIB7 0.66 View Alignment NC_009815_CDS_0024 M T I K L L D E F L K K H D L T R Y Q L S K L T G I S Q N T L K D Q N E ----K P -L -N K Y T V S I L R S L S L I S (60)
M LKK + + GI +++ KP ++ T L S+ L
AcrIB7 M R --T F K M L L K K Y N V E I K D V I Q K G G I D K S S I Y T L A N K E K S K P D -S S R I T G A M L Q S V A L T V
NC_009815_CDS_0024 G L S V S D V L F E L E D I E K -N S D D L A G F K H L L D K Y K L S F P A Q E F E L Y C L I K E F -E -S A -N I E V (120)
G+ V+ +L +E + L + A +
AcrIB7 G I D P G T V I N D L L Y L E Q E V G I L A E E M Q N T L V N V I Q T E -------------G K -E -A A -L K F
NC_009815_CDS_0024 L P F T F N R F E N E E H V N I K K D V C K A L E N -A I T V L K E K K N E L -L (161)
LP + E E E
AcrIB7 L P G F I F K V V --E Q E -------E F K E -E F E R Y Y S E F I L A Y K G
NC_009815_CDS_0024 4 AcrIIC9 0.64 View Alignment NC_009815_CDS_0024 M T I K L ---L D E F L K -K H D L T R Y Q L S -K L T G I S Q N T L K D Q N E K P L N K Y T V S I L R S L S L I S G (60)
MT + + E ++ K G+S+ +L + + + ++
AcrIIC9 M T N L I M Q K I V E S E I T N N Y T S K K A F A E K Y L G V S N V S L S R Y L S G -E Q G L K A E T M N R V E A L F T
NC_009815_CDS_0024 L S V S D V -L F E -L E D I E K N ---S D -D L A -G ---F ----K -H -L -L -D -K -Y -K L S ------(120)
+ L ++ + + +
AcrIIC9 H Y E L C I I -K K M L L A S M H T P E F R E N P -V G E F N R L K L E I A K -K -W -V -S -Y -N R S F L D A G T S
NC_009815_CDS_0024 --------------F P A ---Q ---E F E L Y C L I K E F E S A N I E V L P F T F N R F E N E E -H V N I K (180)
+ L+++ +V+ ++
AcrIIC9 E L P C E L K I Q Y Q G P S I D P S Y Q K W S S A V M A V K L V H D N -P M M N D V I T L R L P G V S K -N R A -S A V
NC_009815_CDS_0024 K D V C -K A L E N A I T -V L -K E K K N -E L L (206)
N E +
AcrIIC9 P A G K K -N R Q E W F E K H -I D Q E F N A E -I
NC_009815_CDS_0024 5 AcrIIC7 0.60 View Alignment NC_009815_CDS_0024 M T I K L L D E F L K K H D L T R Y -Q L S K L T G I S Q N T -L K -D Q N E K -P L N K Y T V S I -L R S L S L I S G (60)
M++ ++ FLK + + + K + + P+ + +
AcrIIC7 M N V I E A E K F L K P K -T N T -T T F -K F L -V D E K -L T -A N L T G M K P I G R --I -D T -Q ---R F L E
NC_009815_CDS_0024 L S V S D V L F E L E D I E K -N S D D L A G F -K H -L L D K Y K L ----S -F P A -Q E F -E L Y C L -I K E F E (120)
L + + I
AcrIIC7 S H R ----A S E F -K I -L L D N P L K E L L -N Y Y -G L T Q Y Y L Q K -E V G -L S Q -S T V S K -L I S -D N
NC_009815_CDS_0024 S -A N I E V L P F T F N R F E N E E -H V -N -I K K D V C K A L E N A I T V L K E K K N E L -L (170)
+ F + I + + ++ LKE +
AcrIIC7 R P I -G S ---F -----Q F -A V -L L -K I A E A T N R S V G E V A D Q L K E F N D L R D A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;