3D Structure for MZ501267_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MZ501267_CDS_0027 1 AcrIIA27 0.70 View Alignment MZ501267_CDS_0027 M K L Y L I E -R T -D K --Y -R D -Y D N Y C A T V V A A P T E E R S R E L A L A L F A E G D Q -S S S D E F -L N (60)
MK I + V A + A SS N
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y ---S -F -S S K W K F -N
MZ501267_CDS_0027 -V S T -V A I N A ---L -V P E G I I L S E -Y N A G (89)
AI L
AcrIIA27 M R D -L T A I D N T H R R A W G -R R Y L -R V E E -A
MZ501267_CDS_0027 2 AcrIE2 0.66 View Alignment MZ501267_CDS_0027 M K L Y L I E R T D K Y -R D Y D -N Y C A T V V A -A P ----T E -E -R S -R -E -L A L A L F A E G D Q S S S D (60)
M YLI+ + TV + ++ F +
AcrIE2 M N T Y L I D P R K N N D N S G E R F ---T V D -A V -D I T A A A K -S -A A -Q -Q I L G E E F E G L V Y R E T G
MZ501267_CDS_0027 E F L N V S -T ------V A I -N ---A L V P E G I I L S E -Y -N A G (99)
E + G
AcrIE2 E S N G S G M -F Q A Y H H L H G T -N R T E -T T V G Y P F H -V -M E -L
MZ501267_CDS_0027 3 AcrIC9 0.62 View Alignment MZ501267_CDS_0027 M -K ----L Y L I E R T D K Y R D Y D N Y C A T V V A A P T E E R S R E L A L A L F A E G D Q S S S D E F L N V S T (60)
M Y I + A T+ + +
AcrIC9 M E T K M T S F Y K I T A -Y ----N -S -Q A L Y -F W G T D A D V D R Y -V D W L N R D R ---E I N V Y A A E A
MZ501267_CDS_0027 ------V ---A -I N A L V P E G I I -L -S E Y -N A -G (93)
+ ++ + +A
AcrIC9 I P E A E W A Q Y E -G R D D V L S G -E E C G W D D F M S A E A
MZ501267_CDS_0027 4 AcrIIC1 0.60 View Alignment MZ501267_CDS_0027 M K L --Y L I E R T D K Y R D Y D -N -Y C -A T V V A A P T E E -R S R E L A L A L F A E G D Q -S S S D E F L N V (60)
M Y I ++ +++ +E + + + D +++L
AcrIIC1 M A N K T Y K I G K N A G -Y -D -G -C G L C -L A A I S E N E -A I K V K Y L R D I C P D Y D G D D K A E D W L R W
MZ501267_CDS_0027 -S T ---V A I -N -A -L V P -E G I I L S E --------Y N A G (97)
+ A+ + +
AcrIIC1 G T D S R V K A A A -L -E -M E Q Y -A -Y T S V G M A S C W E F V E L
MZ501267_CDS_0027 5 AcrIIC5 0.55 View Alignment MZ501267_CDS_0027 M K ---L Y L I E R T --------------------D K ----Y R D Y -D N Y C A T V V A A P T E E R S R (60)
M + + Y + +
AcrIIC5 M N N S I K F H V S Y D G T A R A L F N T K E Q A E K Y C L V E E -I N D E M N G Y K R K S W E E K L R E E N C A ---
MZ501267_CDS_0027 E L A L A L F -A -E --G D Q S S S D E F L N -V S T -------------V A I N A L V P E G ---------(120)
+ +SS + N + V
AcrIIC5 -S V Q D W -V -E -K N -Y T S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T L E D D L
MZ501267_CDS_0027 -------I I -L S E ----Y -N -A G (143)
L+
AcrIIC5 E E F N K A K Q -Y L Q K F Y A E -C -E -N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;