3D Structure for MZ501263_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MZ501263_CDS_0001 1 AcrIE6 0.73 View Alignment MZ501263_CDS_0001 M I M D I Q ---V L T D K L E D M Q D T R S D L M A Q Y E E T ---G ---A A E L L E D I E E L D Y D I E E L H I S (60)
M D E D D + + + + + ++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L ---E I L -S P M Y T A V M V T Y D L I G K Q L A S R R A E
MZ501263_CDS_0001 I Q I M Q E N A -P Y E H M T T M -Q R E M K L S G L S Q -A D F -I (95)
+ E P H
AcrIE6 L I E I L E E Q Y P G -H A A -D L -------S -I -K -N L C P
MZ501263_CDS_0001 2 AcrIF23 0.57 View Alignment MZ501263_CDS_0001 M I M D I Q ---V ----L T -------------------------------------D ------(60)
M +
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MZ501263_CDS_0001 ---K L ----E D M Q D T R S D L M A Q Y -E E T G A A E L L E D -I -E E L D -Y -D I E -E L H I S I Q I M Q E (120)
+ + A + + +E + + ++ I
AcrIF23 G G R A -L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E -M -A C D P -S -G L L -T A A K F W I E N R -N
MZ501263_CDS_0001 ----N -A -P ----Y E H M -T T M Q R -E M -K L S -------G -------L S Q A D F -I (173)
A R + +A +
AcrIF23 D S A Q E I A G -F V M Q Q K A L L A -Q H R S -A K A --A G Q A D K V A K I A A E Y N A L T A R W G F
MZ501263_CDS_0001 3 AcrIE1 0.57 View Alignment MZ501263_CDS_0001 M I -M ---D I Q V L T ----------D -----------K -L -E -D M Q D T R S D L M A Q Y E E T G A A (60)
M +L + +T SD
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V -F -Q A E T L S D Q A N E L A N Y I R R
MZ501263_CDS_0001 -E L L E D I E E L D Y D I E E L H I S I Q I M Q E N A P Y E H M T T M Q R E M -K L S G L S -Q -A D F I (114)
LE++E + I+ ++ + D
AcrIE1 Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I -R ---V Y G -D ---A I -D R D V D
MZ501263_CDS_0001 4 AcrIF2-IC2 0.56 View Alignment MZ501263_CDS_0001 M -I M D I ---Q V L T D K L E D M Q D T R ------S ----D L M A ---Q Y E -E -T G -A A E L --L E D I (60)
M + + D Y + +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E A I A I A K D Q V W D G -E G Y T K Y T F -D -D N S V L I Q S G T T Q
MZ501263_CDS_0001 E E L -D -Y D I E E L H I S I Q I M Q E N A P Y E H M T T M Q R E -M -K -L S G -L S Q A D F I (110)
D++ ++ + + A + E +
AcrIF2-IC2 Y A M D -A D D A D S I K G Y A D W L D D E A R S A E A S ----E I -E -R -L L E S -V E E -E
MZ501263_CDS_0001 5 AcrIIC4 0.54 View Alignment MZ501263_CDS_0001 M I M D I Q V L T D K L E ---D M Q -D T R S D L M A Q Y E E -T G A A E L -L -E -D -I E -E -L -D -Y -D I E (60)
M + + S L +
AcrIIC4 M K I T S S N F A -T I A T S E N F -A -K L S V L P K ----N -H ----R -E -P -I -K G -L -F -K -S -A V
MZ501263_CDS_0001 -E L H I S I -Q I M Q E ---------N ----A -P Y E H -M T T M Q R E M K L S -G L S Q A D F I (114)
S+ E Q+ L + +
AcrIIC4 E -Q F S S A R D F F K N E N Y S K E L A E K F N K E -A V N E -A V E K L Q K A I D L -A E K Q G I Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;