3D Structure for MZ348422_CDS_0194 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.10 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MZ348422_CDS_0194 1 AcrIIA7 0.73 View Alignment MZ348422_CDS_0194 M E T T E V R T L S F -S E V L N G L K A G R K Y Q R R G W A G K G L Y V Q L --------------H G S L P A -(60)
M +L LK G+ R+GW GKG + SLP
AcrIIA7 M T -------F -G -Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S
MZ348422_CDS_0194 V S L -------E G ----E T K Y I D K F F -V I V -N G E R V N T W V P S V S D L L A E D W I E V L (114)
G + + G VN W+ S +D LA DW+ V
AcrIIA7 F --K R W V A N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MZ348422_CDS_0194 2 AcrVIA3 0.56 View Alignment MZ348422_CDS_0194 M E T T E V R T L S F S E V -L N G -L K A G R K Y Q R R G W A G K G L Y V Q L ---H G S ----L P A V S L E G E -(60)
M E L+ G Y + + HG ++ G
AcrVIA3 M F -K E ----F ----L E K -C L R Y G N L Y I L E E T G D R K K V K R I S K R H G K V T E A S V L L F D S G T K
MZ348422_CDS_0194 T K Y I D K F F V I V N G E R V N T W V P S V S D L L A -E D W I E V L (96)
I + +G +
AcrVIA3 R T T I N E I Y L N S Q G Y F I I R D -Q --K -R --L -K L E K F K
MZ348422_CDS_0194 3 AcrIIA4 0.55 View Alignment MZ348422_CDS_0194 M E T T E V R T L S F S -E V L N G L K -A -G R K Y Q R R G W A ---G K G L Y V Q L -H G -S L P A -V S L -E G -(60)
M + ++ +K G L + + +S
AcrIIA4 M N I N --------D -L I R E I K N -K D Y T V K L S G T D S N S I T Q L I I R V N N -D G N E Y V I S -E -S E
MZ348422_CDS_0194 E T K Y -I D K F F V I V N G E R V N T W V P S V S D L L A ----E -D W I -E V L (103)
++KF + + + E+
AcrIIA4 N E -S I V E K F I S A F K N G W N Q -E Y E D E E E F Y N D M Q T -I T L K S E L N
MZ348422_CDS_0194 4 AcrIF18 0.53 View Alignment MZ348422_CDS_0194 M E T T E V R T L S F S E V L N G L K A G R K Y Q R R G -W A G -K G L Y -V Q L H G S L P A V S L E G E T K Y I D K F (60)
M T ++ + + W Y + G V G
AcrIF18 M T -T -I K A A Y ---------I S ---K D Q -N W N D G T T T Y W F D V N G E T F G V V H G G -E S W N ---
MZ348422_CDS_0194 -F -V I V N G -E R V N T W V P S V S D L L A E D W -I E V -L (93)
V+ + + +
AcrIF18 A -K V V D C D G A P S D Q Y T V D Q F --N I T -E D -M I A E
MZ348422_CDS_0194 5 AcrIIA24 0.48 View Alignment MZ348422_CDS_0194 M E T T E V R T L S F S -E -V L N G L K A G -R K Y Q R R G W A G K G -L Y V -Q L H G S -L P A V S L -E G E T K Y (60)
M + L +K Y +Y + + + E+
AcrIIA24 M K -K -A ----Q -Q -L -L K E I K T N N V S Y A I M D -E -D N E I Y C N K E T N N I M D I Y -G Y D N E N G H
MZ348422_CDS_0194 I D K F -F -V I V N G E R V N T W V ---------P ----S V S D L L A ----E ---D -W -I E ---V -L (120)
+V G + +
AcrIIA24 F Y G V Y -G D V V D G Q I D S R Y F S D D A I L N A I D K L L F L G D P I K -R T D L P S D A -D -F K R T F F F E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;